Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00403 ATGTCTCTGCATCTACCATCATTCATGAAGCAAATGCCTTATGACCTAAATGCTACCCTTTTCATGGTACTTTCCTTCTTCATCAGCATGTTGCTTGTGTTTAAGATCACAAGAAGATGCAAACTAAACCTACCTCCTTCCCCACCAAAACTACCTATAATTGGCAATTACCATCAGTTAGGAACACTGCCTCATCGCTCTTTTCGAACCCTCTCACAAAAATACGGTCCTCTATTGTTGTTGCATCTAGGTCAGCTTCCCGTTTTGGTGGTTTCCTCGGCAGAGTTTGCCAAAGAAGTTTTGCATACCCATGACCTAGTTTTTGCCAGCAGGCCACACCTCACAGCCACAAGAATCTTACTCTACGGATGTAAGGACATTGCATTTTCATCCTACGGTGACATTTGGAGACAGAAAAGGAAACTCTGCGTGATTGAATTGCTGAGCATGAAAAGGGTGCAATCAGTTCAGTTCATTAGAGAAGAGGAAGTGGAGGCGTTGGTGAGTAACATACGTAATATTTGCTCGAGTAACGGTTGCTCTGTGAACCTAAGCAAGATGCTAATTGCAGCCGCAAACAACGTAGTTTGTAGGTGTATGTTCGGAAGAAAATATGATGATGACGATGGTAATTGCAGTTTTGGAGAGGTTGGGAGGGAGGTGATGATTCAAATTCAAGATTTAAGTTTGGGAGATTTGTTTCCTTTGTTGGGTTGGGTTGGCGTTATGAGTGGCCAAACTAGAAAATATAAGGCCACTTTTGGAGCATTGGATGCTTTCTTTGATCGTGTAATTGCAGAGCGTAAGATGGAAAATAGGGATTCCGAGAAGAAAGACTTCCTCGACACTCTCCTTCAACTTCAAGACAGTGGCAAGCTTGAGTTCGAGCTCACAACAGATGACCTTAAAGCAATCCTCATGGACATGTTTTTGGGAGGAAGTGACACAACTTCAACAACAATAGAATGGGCTATGGCGGAGCTCATAAAAAACCGAGGCATAATGAACAAAGTGCAGGAGGAGGTAAGAAGAGTTGTGGGGAATAAATAA 1050 0.4276 MSLHLPSFMKQMPYDLNATLFMVLSFFISMLLVFKITRRCKLNLPPSPPKLPIIGNYHQLGTLPHRSFRTLSQKYGPLLLLHLGQLPVLVVSSAEFAKEVLHTHDLVFASRPHLTATRILLYGCKDIAFSSYGDIWRQKRKLCVIELLSMKRVQSVQFIREEEVEALVSNIRNICSSNGCSVNLSKMLIAAANNVVCRCMFGRKYDDDDGNCSFGEVGREVMIQIQDLSLGDLFPLLGWVGVMSGQTRKYKATFGALDAFFDRVIAERKMENRDSEKKDFLDTLLQLQDSGKLEFELTTDDLKAILMDMFLGGSDTTSTTIEWAMAELIKNRGIMNKVQEEVRRVVGNK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00403 349 PANTHER CYTOCHROME P450 71B11-RELATED 13 349 - -
Cca03g00403 349 SUPERFAMILY Cytochrome P450 45 348 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00403 349 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 349 - -
Cca03g00403 349 Pfam Cytochrome P450 45 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00403 349 Gene3D Cytochrome P450 36 349 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00403 349 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00403 349 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00403 349 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00403 349 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00403 349 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00403 Cca-Chr3 6219953 6221734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00403 35 349 Cytochrome P450 AT3G48270 43.810 2.81e-85 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00403 K20617 - gmx:100781909 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01781 11 42598528 42665578 Cca03g00403 03 6219953 6221734 PCT