Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00402 ATGAAAAGTGAGATGATCAAAGGAAGAATGGCTGAACAGTGTCTACCATCATTTATGAAGCAAATGCCTTGTGACCTAAATGCTACCCTTTTCACGTTACTTTCCATCGTGATCAGCATGTTGCTGGTGTTTAAGATCACAAGAAGAAGCAAACGAAATCTACCTCCATCCCCACCAAAACTACCTATAATTGGCAATTACCATCAGTTAGGAACACTCCCCCATCGCTCTTTTCAAACCCTCTCACAAAAATACGGTCCTCTATTGTTGTTGCAACTAGGTCAACTTCCCGTTTTGGTGGTTTCCTCAGCAGATTTGGCCAAAGAAGTTCTGCAAAACCATGACCTAGATTTTGCAAGCAGGCCACACCTCACAGCCCCGAAGATCTTACTCTACGGATGCAAGGACGTTGGTTATTCATCCTACGGTGACTTGTGGAGACAGAAAAGGAAACTGTGCGTGATTGAATTGCTGAGCCTGAAAAGGGTGCAATTAGTTCAGTTCATTAGAGAGGAGGAAGTGAAGGCACTGGTTAGTAACATACGTAAAGTGTGTTCCAGTAATGGTTGCGCTGTGAACCTCAGCGAGTTTCTCGTTGCAACCGCAAACAACGTAGTCTGTAGGTGTTTATTCGGAAGGAAATACGATGCTGATGATGGTAAATGTAGATTTGGGGAGCTTGCGAGGGAGGTGATGACTCAAGTTTCAGATTTCAGTTTGGGAGATTTGTTTCCTTTGTTGCGTTGGGTTGGTGTTATGAGTGGCCAAACTAAAAAATATAAGGCTACTTTTGGAGCATTGGATGCTTTCTTCGATCATCTAATTGCAGAGCGTAAGATGGCAAGGAGTGATTCCGAGAAGAAAGACTTCTTAGACGCTCTCCTTGAACTTCAAGACAGTGACAAGCTTGAGTTCGAGCTCACAACTGATGACCTAAAGGCACTCATCATGGACATGTTTTTGGGAGGAAGTGACACAACTTCAACAACACTAGAATGGGCTATGACTGAGCTTGTAAAAAATCCAAGCATCATGAACAAAGTGCAGGAAGAGGTAAGAAGAGTTGTGAGAAATAAATCGAAATTAGAAGCCAATGATATCGATCAGATGGACTATTTAAAATGTGTAGTGAAAGAAACTCTGAGGTTACACCCACCTGCTCCACTTTTGGTTCCTCGAGAAACAAGATCAAATGTTAAACTTGGAGGATATGATATTCCCAATAAAACAATGGTATTTGTGAACGCATGGGCAATTCAGAGGGACCATGAATTTTGGGAAAAGCCTGAGGAATTTATACCGGAGAGATTTGAAAGCAGCGAGGTCAATTTCAATGGTCAAGACTTCCAATTTATTCCATTCGGTTCTGGGAGAAGAAAATGTCCTGGTATGGCGTTTGGTCTTGCTTCAGTCGAAGATATACTTGCTAATATTTTATATTGGTTCGATTGGAAGGTACCTGGAAGTGGTGGATCTGATAAAGAGCTAGACATGAGTGAGAAATTTGGGCTCACTGTCAACAAGAGAGTACCTCTGTATCTTGAACCAATACCATACCCAAACTAA 1566 0.4202 MKSEMIKGRMAEQCLPSFMKQMPCDLNATLFTLLSIVISMLLVFKITRRSKRNLPPSPPKLPIIGNYHQLGTLPHRSFQTLSQKYGPLLLLQLGQLPVLVVSSADLAKEVLQNHDLDFASRPHLTAPKILLYGCKDVGYSSYGDLWRQKRKLCVIELLSLKRVQLVQFIREEEVKALVSNIRKVCSSNGCAVNLSEFLVATANNVVCRCLFGRKYDADDGKCRFGELAREVMTQVSDFSLGDLFPLLRWVGVMSGQTKKYKATFGALDAFFDHLIAERKMARSDSEKKDFLDALLELQDSDKLEFELTTDDLKALIMDMFLGGSDTTSTTLEWAMTELVKNPSIMNKVQEEVRRVVRNKSKLEANDIDQMDYLKCVVKETLRLHPPAPLLVPRETRSNVKLGGYDIPNKTMVFVNAWAIQRDHEFWEKPEEFIPERFESSEVNFNGQDFQFIPFGSGRRKCPGMAFGLASVEDILANILYWFDWKVPGSGGSDKELDMSEKFGLTVNKRVPLYLEPIPYPN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00402 521 Gene3D Cytochrome P450 40 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PANTHER CYTOCHROME P450 71B11-RELATED 23 518 - -
Cca03g00402 521 Pfam Cytochrome P450 55 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 Coils Coil 345 365 - -
Cca03g00402 521 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 23 518 - -
Cca03g00402 521 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 SUPERFAMILY Cytochrome P450 55 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00402 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00402 Cca-Chr3 6215216 6217400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00402 36 517 Cytochrome P450 AT5G25120 42.474 3.20e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00402 K20617 K00495 mnt:21401921 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00402 03 6215216 6217400 Cca03g00402 03 6215216 6217400 ECH
Cca03g00402 03 6215216 6217400 Cca11g01768 11 42349157 42351926 PCT