Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00400 ATGGCTATGCTCTTCGTCTTTGTATCCATTTTCATAGTCCTATTGATGAAGTTCCTCTTTATAGACAAGTCAAGAAAGAGAAGGTCCAATCTCCCTCCAAGTCCTCCTATCATACCCATTATTGGCAACCTCCACCAGGTTGGCTCCTCCTCACCCCACCTAGCTCTTCAAACACTAGCACAAAAGTATGGTCCCATAATTTTCCTACAACTTGGTCAAATCCCAACGGTGGTTGTGTCCTCAGCAAGACTAGCAAAGGAAGTGTTGAAAACCCATGATCTTGCACTTTCTAGCCGTCCACAACTCTTCTCAGCCAAATACCTCTTCTACAACTGCACAGACATTGCTTTCTCTCCTTACGGTGATTACTGGAGGCACATCAGGAAAATTTGCATACTTGAGCTTCTAAGTGCTAGAAGGGTACAATCTTACAAATGTGTTAGAGAAGAAGAAGTTGCTCGTCTAGTTCACAGGGTCAAAGGGTCTTATCCTGGAACCACCGATTTGTCTAAGATGCTGGGGCTGTATGCAAATGATATCCTTTGCCGAGTGGCATTTGGAAGGGAGTTTTCAGAAGGAGGAGACTATCAACGACATGGGTTCCAAAAGATGCTTGATGAGTATCAGGAACTCCTTGGAGGATTCAGTGTTGGTGACTTCTTTCCTTCCTTGGAGTTCTTGCACAGCTTGACGAGTATGAAGTCAAGACTCCAAGACACTTCTCGAAGATTTGATCAACTCTTTGATCAGATACTGAATGAGCACATGAGTGCAAATAATGTGGAGGAGCATAAGGACCTTGTTGATGTTTTACTCGAGGTGCAGAAGAATGGCTCCCACGAGATGCCTCTCACCACTGATAATATCAAGGCAATCATCTTGGACATGTTTGCTGCAGGAACTGATACAACCTTCATAACTCTTGATTGGGCAATGACGGAGCTGCTAATGAATCCACAGGTGATGGAAAAGGCACAAAAGGAAGTTCGGAGCATCTTGGGAGAGAGAAGAGTTGTTGGAGAGAGTGATCTGCATCAGCTGGAGTACATGAGAGCTATTATCAAAGAGATATTTCGGTTTCATCCTGCAGTTCCAGTGCTACTCCCCAGGGAATCCATGGAAGATGCTGTGATAGAGGGGTATAGAATTCCAGCTAAAACGAGATTTTTTGTGAATGCTTGGGCAATAGGTAGGGACCCAGAAAGTTGGGCAGATCCTAATGCATTTAAACCAGAGAGGTTTTTAGGGAGCGATATTGACTACAGAGGGCAGGATTTTGAGCTAATACCGTTTGGGGCAGGTAGAAGAGGTTGTCCAGGTATTACTTTTGCCATTACAACTGTTGAGCTTGCTCTGGCTCAACTCCTCTACAGTTTTGATTGGGAGTTTCCTCCTGGTATAACCCCCAAAGACTTGGACCTCACTGAAGTCTTCGGTATCTCAATGCACAGGAGAGAACATCTTCATGTGGTTGCTAAACCATATTTCCATGAAGACTTGGGATACAACAAGCAAGCATAA 1521 0.4431 MAMLFVFVSIFIVLLMKFLFIDKSRKRRSNLPPSPPIIPIIGNLHQVGSSSPHLALQTLAQKYGPIIFLQLGQIPTVVVSSARLAKEVLKTHDLALSSRPQLFSAKYLFYNCTDIAFSPYGDYWRHIRKICILELLSARRVQSYKCVREEEVARLVHRVKGSYPGTTDLSKMLGLYANDILCRVAFGREFSEGGDYQRHGFQKMLDEYQELLGGFSVGDFFPSLEFLHSLTSMKSRLQDTSRRFDQLFDQILNEHMSANNVEEHKDLVDVLLEVQKNGSHEMPLTTDNIKAIILDMFAAGTDTTFITLDWAMTELLMNPQVMEKAQKEVRSILGERRVVGESDLHQLEYMRAIIKEIFRFHPAVPVLLPRESMEDAVIEGYRIPAKTRFFVNAWAIGRDPESWADPNAFKPERFLGSDIDYRGQDFELIPFGAGRRGCPGITFAITTVELALAQLLYSFDWEFPPGITPKDLDLTEVFGISMHRREHLHVVAKPYFHEDLGYNKQA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00400 506 Gene3D Cytochrome P450 18 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 Pfam Cytochrome P450 32 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 SUPERFAMILY Cytochrome P450 32 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 496 - -
Cca03g00400 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Cca03g00400 506 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 496 - -
Cca03g00400 506 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00400 506 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00400 Cca-Chr3 6121989 6124718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00400 1 491 Cytochrome P450 AT3G26310 43.145 5.35e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00400 - - lang:109326078 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00400 03 6121989 6124718 Cca03g00400 03 6121989 6124718 ECH