Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00399 ATGGAAGCGCTATCCCTTCCCATAAACACTCTCACGAAATCCTCTGCTAAACACATTCCTCTCGCCGCTAATTCTAATTATGCCTCACTATCTTCCTTACAATTCAATCCTTCTTTCACAACCACACCCCACACCTTGAGGAAGAGCCTTCTTCGAGTCCAGGCCCAGAGTGAGGATTATGAATTGAAGCAAATGAGGGACATGGCTGCTGCCAGAAAGAGATGGGAAGCTCTGATCAGAGATGGAAAAGTTAAAGTTCTTACCCCAAGGGAAGCTGGCTATGCAGTTCAGCTTTCAAGCAAGCCCCTTCTTGATGTTCGGCCCTCGAATGAACACAAAAAGGCATGGGTGAGAGCTTCAACCTGGATTCCAATATTTGATGTTGATAATAAACTAGATTTTGGAACCATTCCCACAAAAGTCACAAATTTTGTCATGGGAGGTTGGTGGAGTGGCATGCCTACACTGTCTTATGACAGCCAGTTCTTAGCCAAAGTTGAGGAGAAGTTCCCCAAAGATTCTGAATTAATTGTTGCATGCCAGAAGGGGTTGAGATCACTTGCTGCTTGTGAACTACTGTATAATGCTGGCTATAAAAATCTGTTTTGGGTTCAAGGAGGATTTGAAGCTGCTGAAGAAGAGGATCTCATTGTGGAGGGCCCAGTGCCTCTCAAGTTTGCTGGAATTGGTGGCGTTTCAGAATTCCTTGGTTTTACTGAGCAACAAAGAGCAGCTGCAGCCAAGGAAGGTTGGGGATATAGATTAGTGTTTTCTGCACGCCTGATTGGAGTCTTTCTTGTTGCTGATGCACTATATATTGGTGCTCAGCAAATTGGGCGCTATCTTCAGGATATCAAGACCCATTGA 867 0.4475 MEALSLPINTLTKSSAKHIPLAANSNYASLSSLQFNPSFTTTPHTLRKSLLRVQAQSEDYELKQMRDMAAARKRWEALIRDGKVKVLTPREAGYAVQLSSKPLLDVRPSNEHKKAWVRASTWIPIFDVDNKLDFGTIPTKVTNFVMGGWWSGMPTLSYDSQFLAKVEEKFPKDSELIVACQKGLRSLAACELLYNAGYKNLFWVQGGFEAAEEEDLIVEGPVPLKFAGIGGVSEFLGFTEQQRAAAAKEGWGYRLVFSARLIGVFLVADALYIGAQQIGRYLQDIKTH 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00399 288 Gene3D - 84 253 IPR036873 -
Cca03g00399 288 ProSiteProfiles Rhodanese domain profile. 97 219 IPR001763 -
Cca03g00399 288 SMART rhod_4 87 217 IPR001763 -
Cca03g00399 288 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 19 286 IPR044664 -
Cca03g00399 288 CDD RHOD 103 210 - -
Cca03g00399 288 Pfam Rhodanese-like domain 95 210 IPR001763 -
Cca03g00399 288 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 216 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00399 1 288 Sulfurtransferasese or Rhodanese AT4G24750 64.041 8.96e-139 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00399 - - gmx:100791331 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00399 03 6116625 6120882 Cca03g00399 03 6116625 6120882 ECH