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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca03g00382
ATGACAAGCACTCCACTCTCTTTGCTTTTCATGCTCTTCTCCCTTCTCACTCCAACCCTCATTTCCTCTTCACATGTTCTAAACCCTGAATCTGTCGTACAAGAGGTAAACAGGCAAAGGCTAGCAGACTGTGCAATCGGGTTCGGCAAGAACGCCGTGGGAGGGCGCGACGGGAAGATTTACGTGGTGgacgacgacggcgacgacgacgCGGTGAACCCTAAGCCGGGGACACTGCGGCATGCGGTGATCCAAGACGAGCCACTGTGGATCATCTTCGCGAGAGACATGGTGATCAAGCTGAAGGAGGAGCTGATCATGAACTCCTTCAAGACCATCGATGGCAGAGGGTCTAGCGTCCACATTGCGGGTGGTCCATGCATCACCATACAGTTCGTGACCAACGTCATCATTCATGGCATTCACATACACGATTGCAAGCAGGGCGGGAACGCTATGGTGCGGGACTCCCCACGCCACTACGGCTGGAGAACCGTCTCGGACGGTGATGGGGTGTCCATCTTTGGAGGGAGTCACATTTGGGTCGACCATTGCTCCTTGTCCAACTGCAACGACGGCTTGATCGATGCCATCCATGGCTCCACTGCCATCACCATCTCCAATAATTATATGACGCATCATGATAAGGTCATGTTGTTGGGTCACAGTGACTCTTACACCCAAGACAAGAACATGCAAGTCACTATTGCTTTCAACCACTTTGGTGAAGGCCTTGTTCAAAGGATGCCGAGGTGTAGGCATGGGTATTTCCATGTGGTGAACAATGATTATACTCACTGGGAAATGTATGCCATTGGGGGAAGTGCTAATCCAACCATCAACTGCCAAGGCAACAGATTTGTTGCACCCGATGACAGATTCAGCAAAGAGGTGACAAAACGTGAGGATGCACCAGAGAGTGAATGGCAGGGTTGGAATTGGAGGTCAGAAGGGGATTTGTTGGTAAACGGTGCGTTTTTTACTCCATCGGGTGCTGGAGCCTCTTCTAGCTATTCAAGGGCTTCTAGCTTAAGTGCAAGACCATCTTCACTTGTTGGTTCTATAACAACAGCTGCTGGTGCACTCACATGTAAGAAAGGTTCTCCTTGCTGA
1113
0.4942
MTSTPLSLLFMLFSLLTPTLISSSHVLNPESVVQEVNRQRLADCAIGFGKNAVGGRDGKIYVVDDDGDDDAVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGSSVHIAGGPCITIQFVTNVIIHGIHIHDCKQGGNAMVRDSPRHYGWRTVSDGDGVSIFGGSHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINCQGNRFVAPDDRFSKEVTKREDAPESEWQGWNWRSEGDLLVNGAFFTPSGAGASSSYSRASSLSARPSSLVGSITTAAGALTCKKGSPC
370
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca03g00382
370
Pfam
Pectate lyase
103
287
IPR002022
-
Cca03g00382
370
PRINTS
Pollen allergen Amb family signature
44
61
IPR018082
-
Cca03g00382
370
PRINTS
Pollen allergen Amb family signature
68
93
IPR018082
-
Cca03g00382
370
PRINTS
Pollen allergen Amb family signature
104
120
IPR018082
-
Cca03g00382
370
PRINTS
Pollen allergen Amb family signature
168
189
IPR018082
-
Cca03g00382
370
PRINTS
Pollen allergen Amb family signature
248
267
IPR018082
-
Cca03g00382
370
PRINTS
Pollen allergen Amb family signature
270
289
IPR018082
-
Cca03g00382
370
PRINTS
Pollen allergen Amb family signature
312
336
IPR018082
-
Cca03g00382
370
PRINTS
Pollen allergen Amb family signature
341
364
IPR018082
-
Cca03g00382
370
PANTHER
PECTATE LYASE 18-RELATED
35
367
IPR045032
GO:0030570
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca03g00382
Cca-Chr3
5962244
5964763
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca03g00382
1
370
Polysaccharide Lyase
AT5G63180
73.350
0.0
587
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca03g00382
K01728
-
gmx:100814679
669.848
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca03g00382
03
5962244
5964763
Cca11g01757
11
42227238
42229309
ECH
Cca01g00144
01
1414696
1417135
Cca03g00382
03
5962244
5964763
ECH
Cca03g00382
03
5962244
5964763
Cca03g00382
03
5962244
5964763
ECH
Cca11g01757
11
42227238
42229309
Cca03g00382
03
5962244
5964763
PCT
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