Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00354 ATGAATCCTGAGCTATTTCTTCGAGTTGGAATTAAACCTCCAAAGGGTGTTCTCCTTTATGGGCCTCCTTGTACTGGGTTAGCTAGGGCAATTGCCAGTAATATAGATGCTAACTTCCTAAAGGTTGTTTCAAGTGCCATAATAGATAAGTACATAGGAGAGAGATGTTTGGTTATGCTCGTGATCACCAGCCCTGCATCATTTTTATGGATGCCATTGGTGGTCTTCGTTTCAGTGAGGGAACAAGTGCTGATCGTGAGATTCAGAGAACACTAA 276 0.4239 MNPELFLRVGIKPPKGVLLYGPPCTGLARAIASNIDANFLKVVSSAIIDKYIGERCLVMLVITSPASFLWMPLVVFVSVREQVLIVRFREH 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00354 91 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 1 58 - -
Cca03g00354 91 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 55 IPR027417 -
Cca03g00354 91 Gene3D - 2 55 IPR027417 -
Cca03g00354 91 PANTHER - 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00354 Cca-Chr3 5440793 5441068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00354 9 77 Calmodulin-binding Proteins AT3G56690 40.278 1.88e-08 48.1