Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00352 ATGCGAAGAAGGCTATCCCTCACCGAGTACACCCTCTCGCTCCTCCccgccgccaccgtcgccaccggaacctccgccttcgtggacgccgccagcggccgcAACCTGACGTACTCGCTGTTCCTCCGGCAAGTAAAATCCCTGGCCTCCTCACTACAATCGCTGACTCCTCTGTCGAAAGGCCACGTGGCGCTAATCCTCACCCCATCCTCGCTGCACGTGCCTGTACTCTACTTTGCCCTCTTATCTATCGGCGTAATCGTCGCGCCGGCTAACCCCCTCAGTTCCCCCTCCGAGTTGACTCACCTGGTGCGACTCGCCAAACCCGTTATCGCCTTTGCCACGTCAGCCATCACACCCAACATTCCCTCCCTCCGATTCGGCACCCTCCTCATGGACTCGCCCCTCTTCGATTCCATGCTCCACAACCGTAACGTGGAGGCGCCTAATAAAGTGGAGCTGAGTCAGTTCGACACGGCGGCGATTTTGTTTTCCTCCGGCACGACGGGGCGCGTGAAAGGCGTGGAGTTGACGCACCGGAACTTCATCGCGGTGATTGCGGGGTTTAACCACCTAAGAGCGGTGACGGTGGCGGTGGCAGAAGAGGAGTTGCAGCGGGTCTCTCTGTTCACGCTGCCGCTGTTCCACGTGTTCGGGTTCTTCATGTTGGTCAGGGCCGTGGCCACGGGGGACACGCTAGTGTTTATGCAGAGATTCGATTTCGAAGGAATGCTGAAGGCCGTGGAGAAGTATAGAATCACCAGCATGCCAGTGTCGCCGCCGCTCATCGTGGCACTGGCCAAATCAGAGCTCGTCAAGAAGTACGATCTCGGCTCGCTCAAATTTTTGGGATGCGGCGGCGCGCCGCTTGGCAAGGAGGTCACCGAGGCCTTCGCAACCAAATTCCCCAATGTCGAAATTTCGCAGGTAAGAACAACCtattataaaggttga 954 0.5335 MRRRLSLTEYTLSLLPAATVATGTSAFVDAASGRNLTYSLFLRQVKSLASSLQSLTPLSKGHVALILTPSSLHVPVLYFALLSIGVIVAPANPLSSPSELTHLVRLAKPVIAFATSAITPNIPSLRFGTLLMDSPLFDSMLHNRNVEAPNKVELSQFDTAAILFSSGTTGRVKGVELTHRNFIAVIAGFNHLRAVTVAVAEEELQRVSLFTLPLFHVFGFFMLVRAVATGDTLVFMQRFDFEGMLKAVEKYRITSMPVSPPLIVALAKSELVKKYDLGSLKFLGCGGAPLGKEVTEAFATKFPNVEISQVRTTYYKG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00352 317 ProSitePatterns Putative AMP-binding domain signature. 162 173 IPR020845 -
Cca03g00352 317 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 310 - -
Cca03g00352 317 SUPERFAMILY Acetyl-CoA synthetase-like 22 309 - -
Cca03g00352 317 Gene3D - 35 309 - -
Cca03g00352 317 Gene3D - 38 178 - -
Cca03g00352 317 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 4 310 - -
Cca03g00352 317 Pfam AMP-binding enzyme 23 309 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00352 Cca-Chr3 5418696 5422971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00352 5 309 Monolignol Biosynthesis Gene Families AT5G63380 55.836 1.00e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00352 K01904 - ccaj:109796029 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00352 03 5418696 5422971 Cca03g00352 03 5418696 5422971 ECH