Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00320 ATGGTTTCGGTGTATGAGAAAGTGAAGGGGTTCGCGGGACACAGATGGGTGGTGTTTGTGTGCGCGATGTGGGACATGTCCTTTGCGGGCACTTCCTACATGTTTGGAAGCATATCTCCGGTCATAAAGAGCAGCATGGGCTACAACCAGAAGCAGGTCGCGTTCTTGAGCGTGGCTAAGGATTTGGGTGACAACGTTGGTCTTCTTGCTGGAAAGATCAGCCAGGCTTCACCCATTTGGGGTCTCATACTTGTTGGGATCTTACAGAATGTCATCGGTTATGGCTTGGTCTGGCTCATAGTCACACACAGGTTTCCCTCTTTGCCTTTGTGGCAGCTATGCATTCTAATCTTCGTGGGGCAAAATGGATCAACATATTACAACACAGCAGCACTAGTTTCATGCGTGCAAAGTTTCCCTGAGAGCAGAGGCCCCGTGGTGGGGATATTGAAGGGTTTCGTTGGCCTAAGTGGTGCAATTTGGACTCAAATAATAGCCATGATCAAACTCCCCGACCAAGCCTCTCTGATATTCATCATAGCAGTTGGACCCGCAATGGTTTCATGCACCTTCATGTTCATCATAAGACCCGTTGAGAGTTATAGACAATCAAGAGCCTCTGATGGATCAGGCTTCATGTTTATCTACAGCATTTGTCTCCTCTTGGCTGCTTATTTGATGGGGGTTTTGTTGCTAGAAAACATGCTTGATTTGGACCAAAGCACCATCACATTGTTTGCAGTTGTTTTGATCATTCTCATATTGCTTCCTATTATAGTTCCCATTCTATTGGTTTTCTTCTCTGGACCCCAAAACCCTGACCAAGAAGCCCTTTTGGAACCACCAATGATAGCAGAAGAAACCAAGTCCAAGCATGTGCTTGGACTGGGTGAGAGTGAGACTAGTACTAGTAATTGTACTACAAAAGTAACTACCAAACATGTTGAAAATGAGAAGGCTTCTTCGAAGCTAGAAGTGCTTCCTTTGTCAGAAGGGCCTAGGGACATATTTCAGTTTCAAGCTAGGCTTTGGCAAGGACTCACCAAGGCTTTGAAGAAAATCAAGAGGAAAAATGGGCCACATAGAGGAGAGGATTTCACCTTGTCAGAAGCTATGGTCAAGGCTGATTTTTGGATCATGTTCTTCTCTCTAGTCATGGGAGCTGGATCGGGCTTGACAATCATAAATAACATGGGTCAGATGTGTCAATCATTGGGAGACGACAATGTCAATGTTTATGTGTCGGTTATCAGCATATCCAACTTCCTTGGTCGTGTTGGTGGTGGCTACTTCTCAGAGGTTATAGTAAGAAATTTGGGGTATCCGAGACTTGTTGCATTGGCAGTGATTCAGGCAATTATGTCTTTGGGACTCTGCTACTACGTTTTGGGTTTGGTTGGACAAGTTTACGTGGTGGCCATATTCATGGGTTTTGGGTACGGTGCCCACTGGTCAATTGCACTAGCAGCAGCTTCAGAGCTATTTGGCTTAAAGAACTTTGGAACTTTGTACAATTTTCTCACTATGGCTAGTCCAGCAGGGTCTCTCTTTTTGTCTGGATTTGTAGCAAGCACAATATACGACTATTATGCTGAGGAGCAAGCAAAGCACCGAATGCCTCATGTGACTGGAACCAATGACTTGCTTCTTTGCGAGGGTAACATTTGCTTCTCCATAACGTGTGGAATTTTGGCACTAGTTTGCATTCTTGCGGCTTCTTTGAGCTTGGTCTCGGTTCACCGAACTAAGAGATTCTATGCCCAACTTTATGGGGAGTCTCGAACATGA 1788 0.4513 MVSVYEKVKGFAGHRWVVFVCAMWDMSFAGTSYMFGSISPVIKSSMGYNQKQVAFLSVAKDLGDNVGLLAGKISQASPIWGLILVGILQNVIGYGLVWLIVTHRFPSLPLWQLCILIFVGQNGSTYYNTAALVSCVQSFPESRGPVVGILKGFVGLSGAIWTQIIAMIKLPDQASLIFIIAVGPAMVSCTFMFIIRPVESYRQSRASDGSGFMFIYSICLLLAAYLMGVLLLENMLDLDQSTITLFAVVLIILILLPIIVPILLVFFSGPQNPDQEALLEPPMIAEETKSKHVLGLGESETSTSNCTTKVTTKHVENEKASSKLEVLPLSEGPRDIFQFQARLWQGLTKALKKIKRKNGPHRGEDFTLSEAMVKADFWIMFFSLVMGAGSGLTIINNMGQMCQSLGDDNVNVYVSVISISNFLGRVGGGYFSEVIVRNLGYPRLVALAVIQAIMSLGLCYYVLGLVGQVYVVAIFMGFGYGAHWSIALAAASELFGLKNFGTLYNFLTMASPAGSLFLSGFVASTIYDYYAEEQAKHRMPHVTGTNDLLLCEGNICFSITCGILALVCILAASLSLVSVHRTKRFYAQLYGESRT 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00320 595 SUPERFAMILY MFS general substrate transporter 209 584 IPR036259 -
Cca03g00320 595 Pfam Nodulin-like 15 262 IPR010658 -
Cca03g00320 595 Gene3D MFS general substrate transporter like domains 372 585 IPR036259 -
Cca03g00320 595 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 595 - -
Cca03g00320 595 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 595 - -
Cca03g00320 595 SUPERFAMILY MFS general substrate transporter 14 257 IPR036259 -
Cca03g00320 595 CDD MFS_Mch1p_like 14 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00320 Cca-Chr3 5033398 5037820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00320 3 595 Nodulin-like Gene Family AT5G14120 52.782 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00320 - - gmx:100784744 980.319