Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00285 ATGTTCTCACTGGGTAACACTTTAAATACAGCACTTTCAGTCCTTCTCTTTGTTACTTCTCTCCCCATTTGTGAAACCATGAAGTGGCCAACATGGAAGTCCAAGTCCATCACCATGGCAATGGCAGTGGTTTTGCTTCACTTGAGTTTTTCCTTGGAAGTGTTCTCTCACCCTTCTCATGCAGACATAATTTTTGCTCTTCCTGGACAACCACACGTAGGCTTTCAACAGTTCTCGGGATATGTCACTGTGGATGACAAGAAACACAAGTCTCTCTTTTACTATTTTTCTGAGTCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTGTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTAGGAGTAGGAGCATTCTCAGAGAACGGACCATTCAGACCAAATGGAGAATTTCTGATTAAAAATGATTATAGTTGGAATAAAGAGGCAAACATGCTGTATTTAGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCATATATGACAGTGAATGACGAGGCAACAGCCAGGGACAACCTTGTATTCCTGATACGCTGGTTCAACAAGTTCCCCCAATACAGGAGCAGAGATTTGTTTCTAAGTGGGGAAAGCTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTTATGATTGAAATGAACACAAAGAACAAGATATTCAATCTAAAAGGCATTGCCTTGGGTAATCCAGTTCTAGAATATGCAACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACCTACAACATGTTCACCACAGTGTGTAACTATTCTAGGTACGTGAGTGAGTACTATAGGGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGGGCCAAGTGAGCAAAGAAACCAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCGGTGCTATCACAATCCAAGGTTATTTGTCCTCAAACCCAAGAAGCAAATGAAAGCATAGACGTGTGTGTAGATGACAAGGTCACAAATTACTTAAACCGGAAAGATGTACAAGAGGCACTTCATGCTAAGCTAGTTGGAGTTCGCAAGTGGGATGTTTGCAGCAACGTCCTGGACTATGATATGCTGAACCTGGAAGTGCCTACACTCCCTGTTGTTGGATTACTGATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCCGTGATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGTTGGCAAGAAAATTAGGACTGAATACAACAGGGCCTTATAGAGTATGGTTTGAAGGCCAGCAGGTTGGCGGGTGGACTCAAGTTTATGGCAATATCCTGTCATTTGCTACTGTTAGAGGTGCCTCCCATGAAGCCCCTTTCTCGCAACCTGAAAGATCACTTGTGCTATTCAAGTCATTCTTGGATGGCAGGCCTTTACCTGAAGCTTTCTGA 1488 0.4288 MFSLGNTLNTALSVLLFVTSLPICETMKWPTWKSKSITMAMAVVLLHLSFSLEVFSHPSHADIIFALPGQPHVGFQQFSGYVTVDDKKHKSLFYYFSESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNDYSWNKEANMLYLETPVGVGFSYAKGSSSYMTVNDEATARDNLVFLIRWFNKFPQYRSRDLFLSGESYAGHYVPQLAKLMIEMNTKNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNMFTTVCNYSRYVSEYYRDSVSPLCSKVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQEANESIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNVLDYDMLNLEVPTLPVVGLLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARKLGLNTTGPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLDGRPLPEAF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00285 495 ProSitePatterns Serine carboxypeptidases, serine active site. 205 212 IPR018202 GO:0004185
Cca03g00285 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 56 493 IPR001563 GO:0004185|GO:0006508
Cca03g00285 495 SUPERFAMILY alpha/beta-Hydrolases 67 492 IPR029058 -
Cca03g00285 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 458 475 IPR033124 GO:0004185
Cca03g00285 495 Pfam Serine carboxypeptidase 69 488 IPR001563 GO:0004185|GO:0006508
Cca03g00285 495 Gene3D alpha/beta hydrolase 59 320 IPR029058 -
Cca03g00285 495 PANTHER CARBOXYPEPTIDASE 56 493 - -
Cca03g00285 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 154 IPR001563 GO:0004185|GO:0006508
Cca03g00285 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 165 IPR001563 GO:0004185|GO:0006508
Cca03g00285 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 191 216 IPR001563 GO:0004185|GO:0006508
Cca03g00285 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Cca03g00285 495 Gene3D - 343 379 - -
Cca03g00285 495 Gene3D - 389 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00285 Cca-Chr3 4245278 4248770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00285 351 491 Calmodulin-binding Proteins AT2G22960 29.078 9.38e-17 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00285 03 4245278 4248770 Cca03g00285 03 4245278 4248770 ECH