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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca03g00280
ATGGCATCATCGGAGGTCACCATGAAGGGAAATTGCATCAGCCATAACGACGGAGGAACTGCCGAGCCTCATTCGCCCAAAGACGCCGAAGCAGCACTTTTCAGGGAACTGTGGCACGCCTGCGCCGGTCCTCTCGTCACGGTGCCGCGGGAGAGAGAGCGCGTCTTTTATTTTCCTCAGGGGCATATTGAGCAGGTGGAGGCGTCGACGAATCAAGTGGCGGACCAGCACATGCCGGTTTACGATCTTCCGCCCAAGATCCTTTGTCGGGTCATCAACGTGCAGCTCAAGGCCGAACCCGACACGGATGAGGTGTTTGCTCAGGTCACTTTGCTTCCGGAGCCAAATCAAGATGAGAATGCCGTGGAGAAAGAGCCTCCGCCTCCTCCGCCGCCGCGGTTTCATGTTCATTCTTTCTGTAAGACTCTGACGGCGTCTGATACGAGTACCCATGGTGGGTTTTCCGTGCTGAGACGGCATGCTGATGAGTGTCTTCCTCCCCTGGATATGTCCAAGCAGCCACCCACCCAGGAATTGGTGGCTAAGGATCTTCATGGGAATGAATGGCGATTTAAACATATTTTTCGGGGTCAACCCCGAAGACACTTGCTTCAGAGTGGTTGGAGTGTTTTTGTCAGCTCCAAAAGGCTTGTTGCGGGGGATGCGTTTATTTTTCTTAGaggtgagaatggggaacttcgtgttggtgtccgaagagcaatgagacagcagggtaatgttccatcgtcagttatctccagccACAGCATGCACCTCGGGGTCCTTGCAACCGCTTGGCATGCCATCTTGACGGGGACCATTTTCACTGTTTACTACAAGCCCAGGACCAGTCCCGCTGAATTTATTGTTCCGTATGATCAATACATGGAGTCTCTCAAAAATAATTATAGCATTGGGATGCGGTTCAAAATGAGGTTTGAAGGTGAAGAGGCCCCAGAGCAGAGGTTTACTGGTACGATTGTTGGAATAGAAGATTCTGATCCCAAAAGATGGAGAGATTCCAAATGGAGATGCCTCAAGGTGAGATGGGATGAAACATCTAACACGCCTCGTCCCGATAGAGTTTCCCCGTGGAAAATTGAACCAGCTCTTGCTCCTCCAGCTCTGAATCCTCTTTCAATGCCCAGGCCCAAAAGGCCTCGGGGTAATGCAGTTCCTTCATCCCCAGATTCTTCTGTTCTTACTCGAGAAGCAACATCTAAAGTAAGCATAGACCCTTCACCAACAAATGGGTTTCCAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTGCAGAAAGCAATGAGTCTGATACTGCTGAGAAGTCAGTTGTTTGGCCACCTACAGTAGATGATGAAAAGATCGATGTTGTTTCTACTACTTCAAGAAGGTATGGTTCAGAGAGCTGGATGTCAATGGGGAGGAATGAGCCTACATATTCTGATCTTCTTTCAAGCTTTGGGGCTAGTGGGGATCAAATGAGCCCTGTAGCTTATACAGCTAGAAAGCAATCATTGGATCATGAAGGCAAACTTCATGTGCCTCATCCGTGGCCTGTAATGCCCTCTAATCTGTCACTGAACATCTTGGACTCTAATACAAAAGGTCCTGCACATGGTGGTGATACAACTTACCAAGCTCGAGGGAATTTGAGGTACAGTGCATTTGGTGAATACGCTGCACTGCATAGTCATAAAGTTGAGCATTCACATGGAAACCTGATGCCACCCCCACCCGCACCCGTAACTCAATATCAGAGTCCTTGTTCTAGAGAGCTTATGTCAAAACCAGTGTCAGCAAAAGCTTATGATGCTACGAAACCAAAAGATGGTGACTGTAAGCTATTTGGTATCTCACTTATCAGTGGCCCCGCTGTATCAGAGCCTTCTGTATCACAAAGAAATGTGAGCGAGCCTGCTGATCAGATGCATCTGACACCACACCAACAAAGAACATCTGAAAATGATCAGAAGTCAGACCACTCAAAGGGCTCAAGACCTGCCGAGGATCTAGAGACTTCTCAGGTGCATATGAAAGATGTTCAAGCTAAACCTCTCGGTGGTTCCGCTAGGAGTTGCACTAAAGTTCACAAGAAGGGCATTGCACTTGGTAGGTCAGTGGACCTCACAAAGTACAGCGGCTATGATGAATTAGTTGCTGAATTGGACCAGCTGTTTGATTTTGGGGGTGAATTATTGTCTACTAAAAAGGATTGGCTTATTGTTTATACTGATAATGAAGGTGATATGATGCTTGTAGGCGACGATCCATGGCAGGAATTCTGTGCCATGGTTCGCAAAATTTATATCTACCCTAAAGAGGAGATTCAGAAAATGAGCCCGGGTACCTTGAGTTCAAGAAATGAAGACAGCCAGCCGGCTACGGCTAGTGAAGGTGCAGATGCTAAAGATGTTAAATATCAGCAGCATCAAAAGTTCAATTCAGAAAATGGCCTTGACGCTTAA
2478
0.46
MASSEVTMKGNCISHNDGGTAEPHSPKDAEAALFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPKRWRDSKWRCLKVRWDETSNTPRPDRVSPWKIEPALAPPALNPLSMPRPKRPRGNAVPSSPDSSVLTREATSKVSIDPSPTNGFPRVLQGQEFSTLRGNFAESNESDTAEKSVVWPPTVDDEKIDVVSTTSRRYGSESWMSMGRNEPTYSDLLSSFGASGDQMSPVAYTARKQSLDHEGKLHVPHPWPVMPSNLSLNILDSNTKGPAHGGDTTYQARGNLRYSAFGEYAALHSHKVEHSHGNLMPPPPAPVTQYQSPCSRELMSKPVSAKAYDATKPKDGDCKLFGISLISGPAVSEPSVSQRNVSEPADQMHLTPHQQRTSENDQKSDHSKGSRPAEDLETSQVHMKDVQAKPLGGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFDFGGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSRNEDSQPATASEGADAKDVKYQQHQKFNSENGLDA
825
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca03g00280
825
Pfam
AUX/IAA family
736
782
IPR033389
-
Cca03g00280
825
MobiDBLite
consensus disorder prediction
655
681
-
-
Cca03g00280
825
Gene3D
-
302
372
-
-
Cca03g00280
825
Gene3D
-
136
241
IPR015300
-
Cca03g00280
825
ProSiteProfiles
B3 DNA-binding domain profile.
139
241
IPR003340
GO:0003677
Cca03g00280
825
MobiDBLite
consensus disorder prediction
784
825
-
-
Cca03g00280
825
ProSiteProfiles
PB1 domain profile.
695
777
IPR000270
GO:0005515
Cca03g00280
825
SMART
B3_2
139
241
IPR003340
GO:0003677
Cca03g00280
825
Pfam
B3 DNA binding domain
139
240
IPR003340
GO:0003677
Cca03g00280
825
MobiDBLite
consensus disorder prediction
630
654
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca03g00280
Cca-Chr3
4175482
4180588
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca03g00280
1
810
B3 DNA Binding Superfamily
AT5G62000
63.879
0.0
1059
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3-ARF
Cca03g00280
B3
1.5e-21
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca03g00280
-
-
gmx:100797082
1535.01
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca03g00280
03
4175482
4180588
Cca03g00280
03
4175482
4180588
ECH
Cca09g02358
09
48931353
48937153
Cca03g00280
03
4175482
4180588
PCT
Cca03g00280
03
4175482
4180588
Cca11g01722
11
41746415
41748533
PCT
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