Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00177 ATGGGAGATAAAAGCAATAAAACGGATGAGTATATAGTATGCTATGCACCTACCATGATAACAACAAATGGGGTGTGGCAAGGAGACAACCCTTTGGATTATTCTCTACCTCTTTTCATCTTGCAAATGACTTTAGTTGTGGTTGCCACCCGCATATTCGTCTTCATTCTCAAGCCTTTTCGCCAGCCACGCGTTATTGCTGAAGTCTTGGGTGGAGTAATGTTGGGTCCATCGGTGCTAGGTCAAAGCGAAGCATTTGCCAATGCAGTGTTTCCTCTAAGAAGTGTGATGATTATTGAAACAATGGCAAACATTGGTCTTCTCTATTTTCTCTTCTTGGTGGGGGTGGAGATGGACATAACAGTGATGCGCACTATGGGTAGAAAAGCTGTGGCTTCAGCAATTGCTGGCATGGTTTTGCCTTTCATCATTGGAGTAGCCTTCTCCTTCCTTTTGACCAGAGAATCTGACTCCAACATCAACCAAGGCACTTTCATCCTATTCCTTGGTGTTGCTCTTTCTGTCACTGCATTTCCTGTTCTTGCTAGGATCCTTGCAGAGCTTAAACTTGTCAACACTGAGTTGGGGAAGCTTGCTCTTTCAGCTGCACTCATCAATGATGTGTGTGCTTGGATTCTCTTGGCTTTGGCTATTGCTATGGCTGAGACTGAAACCACTTCATTGGCTTCTCTTTGGGTTCTATTGTCTAGTGCAGCGTTTGTGGCCTTTTGTGCTTATGTTGTTAGGCCAACAGCTATGTGGATAGTTAAGAAAACCCCTGAGGGAGAATCCTTCAGTGAGTTTTACATATCTCTTATTCTTGCTGGGGTCATGATCTCAGGCTTCATAACTGATGCCCTTGGAACTCATTCTGTTTTTGGAGCATTTGTGTTTGGTTTGTCAATCCCAAATGGGCCTCTCAGTTTTACCCTTGTGGAGAAGCTTGAGGACTTTGTTTCAGGCCTTCTGCTGCCTCTCTTTTTTGCCATCAGTGGGCTGAAAACTAACCTAGGGCTCATCCAAGGGACATACACCTGGGCAGTTCTTCTTCTGGTCATTTTTCTGGCTTGCATTGGTAAAATTGTTGGAACCATATTGGTTGCACTGTTCTATCAAATGCCAATGCATGAAGGAGCAGCTCTGGGTTTACTCATGAACACAAAAGGCCTTGTTGAAATGGTTGTTCTGAATGTTGGGAAGGACCAGAAGGTTTTTGACGAAGAATCATTTGCAGTCATGGTGGTTATAACCGTGATAATGACTGGAATCATCGTACCTGCCATATCAATCATTTACAAGCCATCAAGGAATTCCGTATACTACAAAAGAAGAACCATTGAGATATCAAAATCAGATGCTGAGTTCAGAGTCCTAATTTGTGTCCACACCCCTCGCAACGTGCCAACAATGATCAACCTCCTTGAAGCCTCAAACCCCACAAAGAACTCCCCAATATGTGTCTACGTTCTCCACTTGGTGGAACTCAGTGGCCGTACATCAGCCATGCTCATAGTCCACAACACTACAAAATCAGACCTTCCTGCACTCAACAGAACCGAGGCTCAATCAGACCACATAATCAAAGCCTTCGAAAACTACGAGCAACACGCTTCATTCATCTCAGTGCAGCCCTTAACAGCAATCTCCCCTTACTCCACCATGCATGAAGACATATGCAACTTGGCAGCAGATAAACGTGTGTCCCTCATAATAGTTCCTTTCCACAAGCAACAAACGGTGGATGGTGGCATGGAAGCCACAAACATGGCTTATAGAGCCATCAACCAGAATGTGCTTGCAAACGCACCTTGCTCAGTGGGGATTCTTGTTGATAGAAGCTTGAGTGGCTCAAACCGTTTGGCTGCAAACCAAATCTCTCACCATCTTGCTGTGTTGTTCTTTGGAGGACCAGATGATAGAGAGGCTTTGTGCTATGGTTGGAGAATGGTGGAACATCCAGGGATAAGCCTCACCATAATGAGGTTTATCCCAGGTGATCAAGCATCTGAGCCAGTGAAGCAACATAATGACACAGACCCTAACCCTGATGAACCTAGGGTTTTGACAGTGCAAACAGATAAGGATATTCAAAAGAACCTTGATGAGAAGCTCCTACATGAGTTTAGAATGACGTGTGGTGATGATGCTTCCGTTGAGTATGTTGAGAAGATGGTGAACAATGGGGAGGACACAGTGGCAGCAATAAGGGCAATGGATGACATTCATGACCTTTTCATTGTTGGAAGAGGCCAAGGGATGATTTCACCACTCACTGCAGGAATCACTGATTGGAGTGAGTGCCCTGAGATTGGTGCAATTGGGGACCTGCTTGCATCTTCAGACTTTGCAGCCACTGCTTCAGTGTTGGTGGTGCAGCAATATGTTGGGGAAGGTTCACATTATGATGGGTTGGAAACACCACATGGTGATGATTATATGGCTGGTCTTCAATCTACACCACCACCACCACATTAA 2475 0.4489 MGDKSNKTDEYIVCYAPTMITTNGVWQGDNPLDYSLPLFILQMTLVVVATRIFVFILKPFRQPRVIAEVLGGVMLGPSVLGQSEAFANAVFPLRSVMIIETMANIGLLYFLFLVGVEMDITVMRTMGRKAVASAIAGMVLPFIIGVAFSFLLTRESDSNINQGTFILFLGVALSVTAFPVLARILAELKLVNTELGKLALSAALINDVCAWILLALAIAMAETETTSLASLWVLLSSAAFVAFCAYVVRPTAMWIVKKTPEGESFSEFYISLILAGVMISGFITDALGTHSVFGAFVFGLSIPNGPLSFTLVEKLEDFVSGLLLPLFFAISGLKTNLGLIQGTYTWAVLLLVIFLACIGKIVGTILVALFYQMPMHEGAALGLLMNTKGLVEMVVLNVGKDQKVFDEESFAVMVVITVIMTGIIVPAISIIYKPSRNSVYYKRRTIEISKSDAEFRVLICVHTPRNVPTMINLLEASNPTKNSPICVYVLHLVELSGRTSAMLIVHNTTKSDLPALNRTEAQSDHIIKAFENYEQHASFISVQPLTAISPYSTMHEDICNLAADKRVSLIIVPFHKQQTVDGGMEATNMAYRAINQNVLANAPCSVGILVDRSLSGSNRLAANQISHHLAVLFFGGPDDREALCYGWRMVEHPGISLTIMRFIPGDQASEPVKQHNDTDPNPDEPRVLTVQTDKDIQKNLDEKLLHEFRMTCGDDASVEYVEKMVNNGEDTVAAIRAMDDIHDLFIVGRGQGMISPLTAGITDWSECPEIGAIGDLLASSDFAATASVLVVQQYVGEGSHYDGLETPHGDDYMAGLQSTPPPPH 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00177 824 PANTHER CATION/H+ EXCHANGER 3 8 811 - -
Cca03g00177 824 Pfam Sodium/hydrogen exchanger family 45 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca03g00177 824 Gene3D - 38 438 IPR038770 -
Cca03g00177 824 PANTHER CATION/H + ANTIPORTER 8 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00177 Cca-Chr3 2681849 2686280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00177 8 808 Antiporter Super Family AT2G13620 69.788 0.0 1140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00177 - - gmx:100818927 1398.65