Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00164 ATGGTGAGGCTTTTAGGATTGACTCGTGGGGAGGTTGAAGAACCCAGGGAAATTGCTTCCAGGTCCAATTTGACAAGTGAGTCCAGTGAAAATGGGTGGCTCATTAGGTTCTTTGACTCGTCATTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGATCACTCCGGGGTGCGTGATTATCTCTGTAATAGAATGTACACCCTTCCCTTGCAGGGGATTGAGAGTTATTTGTTCCAAGTGTGTTACATGATGATACACAAGCCCAGCCCGTCTTTGGATAAGTTTGTTATAGACGTGTGCTCAAAGTCGCTTAAGATTGCTTTGAAGGTGCATTGGTTTGTGTTGGCCGAGCTCGAGGACTCTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGCCAGATTGCAGCCACCTTGATGGGTGAGTGGCCACCCTTGATACGGCCTCAAAATCCGCCTTCGAGCCCAGGAGGCAAGAACCAAGTTTTGAATAAGATATTTTCCTCGAAACAGCGATTGTTGTCATTAACGTCTTCTCCCACTCCTCAGAAGTCTTTGTCATTCTCACCTTCTTCGGGAAACAATTTGCAAGAAGATGGTAGTCCACAGTCTCCAGAGGAAAATAAATTATTTAAGAAATTTAGGCCAGGTCCAAAGGTTAGAGATGCTTTACTTTTTAGGAAGTCAGTGGAGAAAGATGATGATGAGTCTGAGAAGGATGGTTTTTTCAAGAGGTTTTTAAGAGATAACAAAGGAGATGAAGAGTTGGGCCAGAAAATTCGCGATGCTTTTCTCTTCCGAAAGTCATCTGAGAAATATGACGAAGATTCTGAAAAGGATAATTTCTTTAAAAGGCTCTTAAGGGATGGTAAAGGGGATGATGAAGAATCTGAAAAGGATGGTTTCTTTAGAAGACTCTTAAGAGACAGTAAAGCTGAGGATGAGGATTTGGCCTCAAGTTCAGAGGGATTCTTTAAGAGATTGTTTCGAGATAGCAAGAATGATTCCGATGATAAAACACACATCAAGACATCAGAGGATGAAGAAAAAGAGGGGTTTTTCCGAAAGTTCTTTAGAGAAAAATTTGAGGAAAAGAAGGATGGGAATGACGAAGGAGATATTGCAAATTCTGAAGAGAAATGTGCAAAGCCTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCAAGAAATTCTTTAAGGATAAATTTGATGATAAGAAAGATCTAAATGATAAAATTGAAGATGGTATAACCAATGTTGAGGAAGAAGAGCCTTCTGATTTTTCTTTGTTCAAAAGAATTTTCCGTGTGCACCCTGAAGATGGTAAAAGTAGTTCTGCCAATGAAAACAATGGTGGGTTGTTTGAAAGTAGTAGTCCAGGTACAGAGAATTTTTTCCGCAAATTGTTTAGAGACCGTGACCGATCAATTGAAGATTCAGAGCTATTGGGGTCAAAAAAACAGAAAGAGAAGCATCCTGGATCACCAAAACAGCGAAATGAGAAATTAGGAACAAAGCCCCCACTTCCAAGTAATCCATCGCAGTTCCGGAAAGGAGCTTACCATGAGTCATTGGATTTTGTGCTGTCATTATGTGAGACATCATTTGGGTTAGTGGATGTATTTCCTGTTGAAGATCGCAAAAGTGCTCTGCACGAGTCGCTTGCAGAGATAAATTTACATTTAACAGAGTCTCAGAATACTGGAGGAGTTTGTTTTCCATTGGGAAAGGGCATGTATCGTGTGATTCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCACCTTACCTGATTTGTGTTGAAGTTTTGAGATGTGAAATGCCAAGCAATTCCAAGGAGACATCTAGTTCTCAGAAACTTTCTAAAGGTGGGATTCCTTTGGCAAATGGAGATGCTTTCTTGCAAAAACCGCCCCCTTGGGCATATCCATTATGGACTGCACAAGAAGCATATCGCAATAGCAATGACAGAATGTCCAGATCAACTGCTGAGGCTATTGACCAGGCAATGACTCATGTGCCTGATGCAAAAGTCAAATTTGTTAGTGTGAATCTTTCTGTTGAAGCACAACTACATGGTCGGCCAGAGAAGGCCAAAGCAGATCTACATGGTGGCAATTGGCATCCTGCTTCAGTTTACAGAGATGGTATACAAGAAGTGGCAAGGCCAGGACATGACAGTGATATGGAGTGGGTAAGGGTAGTGTTGAAAGTTGATCCTGGGGTTAAAATGGAAGATATTGAGGATCAAGCACCAAGGCGGCGGAAGGAACATCGTCGTGTTCCAAGTACAGTGGCAATAGAGGAAGTAAAGGCTGCTGCAGCAAAAGGAGAAGCACCCCTTGGACTCCCTTTGAAAGGTGCCGGCCAAGATTCATCTGAAGCACCACCAAGGGCTAATGGAATTATCCCCAAAGCTAGTGATGCGTTGTCTGGTGAACTTTGGGAGGTAAAGAAAGAGAGGATACGCCAGGCCTCTATCCATGGGAATTTACCTGGTTGGGACTTGCGATCTGTTATTGTAAAGAGTGGGGATGATTGTAGGCAGGAGCATCTGGCAGTTCAACTTATTTCACACTTCTATGATATTTTCCAAGAAGCTGGCCTACCTCTCTGGCTGCGCCCTTATGAAGTGTTATGTACTTCTTCTTACACTGCTCTTATTGAAACAATTCCAGATACGGCTTCTCTACATTCTATCAAGAGTAGATACCCCAACATCTCAAGTTTACGTGAATTTTTCATTGCCAAATATCAAGAAGATTCTCCAAGTTTTAAACTTGCCCAGAGGAACTTTGTTGAAAGTATGGCTGGATATTCCCTGGTTTGCTATCTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCTTAATGGATGAAGAAGGTCATATTATACATATTGATTTTGGCTTCATGCTTTCCAATTCACCTGGTGGTGTTAATTTTGAAAGTGCACCTTTCAAATTAACCCGAGAGCTTCTTGAGGTCATGGATTCTGATGCAGAGGGCATTCCAAGCGAGTTTTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGCCGTAAGCATGCTGAGCGTATTATTCTTCTTGTTGAGATGTTGCAGGACTCTGGTTTCCCCTGCTTTAAAGGTGGTCCACGGACAATACAGAACCTACGAAAACGTTTCCATCTCAATTTAACAGAAGAGCAATGTGTATCTTTGGTGCTTTCCCTCATTAGCAGCAGCCTGGATGCATGGCGGACACGGCACCTCTTTTCTCCTGGTGATAGTGGGAGGAGGATTCTGACTTTCCAAAGTACTTCAACAGTTAATTTTAGCGGGAGTTCGGACCAGATTTATATTGGATGTGGATTGAGTACTGACGTCCCCGGGTTCCACTGTGCCGATGACTTTTCTTCTGAGCAAGGGGTCGTCATCCACCGTGTGCCTCCGTTTCACCTCCATGAACCGAGGCAGGCTTTGGCGATCCTGGAACTTCTTCTTCCGCCACTGGACTTGACCCTCTTTCACTCTCTTCTTCTCTTCAATTCATATCCGGTTCCGGGGTTTCGGTTTTTTCCCACTGACGTTGAGCTGGTTCAGTTTTATCTGAAATGGAAAGTCATGGGTAAGAAAATGCCTATGGAAGTAATGGCTGAACTTGACTTGTACAAGTATGCTCCATGGGATCTCCCAGACATGTCTTTGCTCAAGACTGGGGATTTGGTGTGGTTCTTCTTTTGCCCTAAGGGAAAGAAGTATTTGTCTGGAGAGAGGTTGAATAGGGCCACGGAGATTGGATACTGGAAGACTACCGGGAAGGATAGAGAAATTGAACACAATAATCGAGTTGTGGGGATGATTAAAACACTGGTTTTTCACACAGGGAAAGCCCCTAAAGGAGATAGAACTGATTGGGTTATGCATGAGTTTAGAATTGTTGACAAGGAATTGGCGGACAAAGGGGTTTCACTGGACTCCTGTGTGATTTGTAAGGTGTTCCAAAAGGAAGGTCTTGGTCCCAGGAATGGTGCACAGTATGGTAAACCATTTAACGAGAAAGACTGGGATACAGAAAAGGAAATTGATCCTGTACAATCTGCTGCTGTGTCTGCACCTGTTTTTATACAACCTAATGCAAGTCATATTTCTGCCCAAAACAATGATGTTGGTTCTGTATCAGAATTGATGGCCTTTGGATCTGTATCAGAGATGATGACCTCTTGCTCGGCACATCCTTCCACCCCAAACAATGAAGTTGGATCTGTATCAGAGATGATGACCTCTTGCTCGGCACATCCTTCCACCCCAAACATTGAAGTTGGATCTGTATCAGAGATGATGACCTCTTGCTCGGCACATCCTTCCACCCCAAACATTGAAGTTGGATCTGTATCAGAGTTGATGACCTCTTGCTCGGCATATCCTTCCACCCCAAACAATAAAGTTGGCTCTGTATCAGAATTGATGGCCTCTTGCTTGGCACATCCTTCTGCCCCAAACAATGAAGTTGGATCTGTATCAAAGTTGATGACCTCGTGCTCTGCACAACCTTTCGCCTCAAACAGTGAAGTTGGATATGTATCAGAGTTGATGCCCTCTTGCTCAGAACATCCTTTGGATCCTAACAATCAAGTTGATGATGACGTTATATCTTTGCTTGATTGGTTCACAGAGGGTGACATATCAGCCATGAATGAAAACAATGGAATTAAGAAGGTTGATGATCCGGATCAGGCAAACGATGCTGAATGCGCACCATGTTCAGATCCAAATGAGATTTTTGAGAACTTAGGAGACCTTGACAGCTTCTTTGGATTGGGTGAAGGCAGTCTTTCCAGTGGCCAGAAAAATAAATATACTACTACAAGCGAAGTGCTTTCTGTAGGTGGTGATATATTCAGCTCTTGTGACCCCGTGGGCTACTTGGAGTTGTTTGACCTAGAGGAACTACAGCTCTTGCAGAATAAACACGGAAGTTGTAGCCAAGATAAGGAGGGTTAG 5019 0.4306 MVRLLGLTRGEVEEPREIASRSNLTSESSENGWLIRFFDSSFFCEWIAVSYLYKHDHSGVRDYLCNRMYTLPLQGIESYLFQVCYMMIHKPSPSLDKFVIDVCSKSLKIALKVHWFVLAELEDSDDNEGISRIQEKCQIAATLMGEWPPLIRPQNPPSSPGGKNQVLNKIFSSKQRLLSLTSSPTPQKSLSFSPSSGNNLQEDGSPQSPEENKLFKKFRPGPKVRDALLFRKSVEKDDDESEKDGFFKRFLRDNKGDEELGQKIRDAFLFRKSSEKYDEDSEKDNFFKRLLRDGKGDDEESEKDGFFRRLLRDSKAEDEDLASSSEGFFKRLFRDSKNDSDDKTHIKTSEDEEKEGFFRKFFREKFEEKKDGNDEGDIANSEEKCAKPAEEDEKEGFFKKFFKDKFDDKKDLNDKIEDGITNVEEEEPSDFSLFKRIFRVHPEDGKSSSANENNGGLFESSSPGTENFFRKLFRDRDRSIEDSELLGSKKQKEKHPGSPKQRNEKLGTKPPLPSNPSQFRKGAYHESLDFVLSLCETSFGLVDVFPVEDRKSALHESLAEINLHLTESQNTGGVCFPLGKGMYRVIHIPEDEAVLLNSREKAPYLICVEVLRCEMPSNSKETSSSQKLSKGGIPLANGDAFLQKPPPWAYPLWTAQEAYRNSNDRMSRSTAEAIDQAMTHVPDAKVKFVSVNLSVEAQLHGRPEKAKADLHGGNWHPASVYRDGIQEVARPGHDSDMEWVRVVLKVDPGVKMEDIEDQAPRRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSEAPPRANGIIPKASDALSGELWEVKKERIRQASIHGNLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFIAKYQEDSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLMDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGPRTIQNLRKRFHLNLTEEQCVSLVLSLISSSLDAWRTRHLFSPGDSGRRILTFQSTSTVNFSGSSDQIYIGCGLSTDVPGFHCADDFSSEQGVVIHRVPPFHLHEPRQALAILELLLPPLDLTLFHSLLLFNSYPVPGFRFFPTDVELVQFYLKWKVMGKKMPMEVMAELDLYKYAPWDLPDMSLLKTGDLVWFFFCPKGKKYLSGERLNRATEIGYWKTTGKDREIEHNNRVVGMIKTLVFHTGKAPKGDRTDWVMHEFRIVDKELADKGVSLDSCVICKVFQKEGLGPRNGAQYGKPFNEKDWDTEKEIDPVQSAAVSAPVFIQPNASHISAQNNDVGSVSELMAFGSVSEMMTSCSAHPSTPNNEVGSVSEMMTSCSAHPSTPNIEVGSVSEMMTSCSAHPSTPNIEVGSVSELMTSCSAYPSTPNNKVGSVSELMASCLAHPSAPNNEVGSVSKLMTSCSAQPFASNSEVGYVSELMPSCSEHPLDPNNQVDDDVISLLDWFTEGDISAMNENNGIKKVDDPDQANDAECAPCSDPNEIFENLGDLDSFFGLGEGSLSSGQKNKYTTTSEVLSVGGDIFSSCDPVGYLELFDLEELQLLQNKHGSCSQDKEG 1672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00164 1672 SUPERFAMILY ARM repeat 54 125 IPR016024 -
Cca03g00164 1672 MobiDBLite consensus disorder prediction 483 519 - -
Cca03g00164 1672 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Cca03g00164 1672 PANTHER PHOSPHATIDYLINOSITOL KINASE 324 1095 IPR015433 GO:0046854|GO:0048015
Cca03g00164 1672 PANTHER PHOSPHATIDYLINOSITOL KINASE 4 258 IPR015433 GO:0046854|GO:0048015
Cca03g00164 1672 PANTHER PHOSPHATIDYLINOSITOL KINASE 262 331 IPR015433 GO:0046854|GO:0048015
Cca03g00164 1672 MobiDBLite consensus disorder prediction 369 390 - -
Cca03g00164 1672 Gene3D - 733 899 - -
Cca03g00164 1672 MobiDBLite consensus disorder prediction 789 811 - -
Cca03g00164 1672 Gene3D - 901 1096 IPR036940 GO:0016301
Cca03g00164 1672 Gene3D NAC domain 1200 1344 IPR036093 GO:0003677|GO:0006355
Cca03g00164 1672 MobiDBLite consensus disorder prediction 447 463 - -
Cca03g00164 1672 SMART pi3k_hr1_6 846 1100 IPR000403 -
Cca03g00164 1672 Pfam Phosphatidylinositol 3- and 4-kinase 846 1053 IPR000403 -
Cca03g00164 1672 MobiDBLite consensus disorder prediction 483 502 - -
Cca03g00164 1672 SUPERFAMILY Protein kinase-like (PK-like) 564 1095 IPR011009 -
Cca03g00164 1672 PANTHER BNAA02G34040D PROTEIN 4 258 - -
Cca03g00164 1672 PANTHER BNAA02G34040D PROTEIN 262 331 - -
Cca03g00164 1672 PANTHER BNAA02G34040D PROTEIN 324 1095 - -
Cca03g00164 1672 ProSiteProfiles NAC domain profile. 1191 1341 IPR003441 GO:0003677|GO:0006355
Cca03g00164 1672 Pfam No apical meristem (NAM) protein 1193 1318 IPR003441 GO:0003677|GO:0006355
Cca03g00164 1672 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 849 863 IPR018936 GO:0016301
Cca03g00164 1672 MobiDBLite consensus disorder prediction 443 463 - -
Cca03g00164 1672 MobiDBLite consensus disorder prediction 181 208 - -
Cca03g00164 1672 SUPERFAMILY NAC domain 1189 1341 IPR036093 GO:0003677|GO:0006355
Cca03g00164 1672 CDD PI4Kc_III_beta 815 1094 - -
Cca03g00164 1672 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 943 963 IPR018936 GO:0016301
Cca03g00164 1672 MobiDBLite consensus disorder prediction 181 217 - -
Cca03g00164 1672 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 821 1092 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00164 Cca-Chr3 2534472 2553715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00164 1 1095 Lipid Metabolism Gene Families AT5G09350 70.071 0.0 1519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Cca03g00164 PI3_PI4_kinase 8.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00164 K19801 - gmx:100781715 1943.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02257 09 47802513 47806238 Cca03g00164 03 2534472 2553715 PCT