Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00147 ATGGAATTGGGAAAACAGTGTTACCTTTTCAGATCGAAAATCGGAGAGGGTTCATTCTCCGCAGTGTGGAGAGCGCAACAGAGACCAAGCGGTGAAGACGTGGCAGTGAAGCAAGTCTTCCTCTCCAAACTCAACCCTCACCTCAAGGCTTCTTTGGATTGCGAGATCAATTTCTTGTCCTCCGTTAACCACCCCAATATTATTCGCCTTCTTCACTTCTTTCAGGATGATGGGTGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGTGGGAATCTATCTTCTTATATTCAAACCCATGGGAGGGTTCAACAACAAACGGCCAGAAAATTCATGCAGCAGCTTGGCTCTGGTCTAAAAGTATTGCACTCTCACGGTATTATTCACAGAGATTTGAAACCAGAGGTAAGGATATTGATATTGTATATGTTTTCCTGA 435 0.446 MELGKQCYLFRSKIGEGSFSAVWRAQQRPSGEDVAVKQVFLSKLNPHLKASLDCEINFLSSVNHPNIIRLLHFFQDDGCVYLVLEFCAGGNLSSYIQTHGRVQQQTARKFMQQLGSGLKVLHSHGIIHRDLKPEVRILILYMFS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00147 144 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 13 135 - -
Cca03g00147 144 Pfam Protein kinase domain 11 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00147 144 Gene3D Transferase(Phosphotransferase) domain 1 4 138 - -
Cca03g00147 144 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 13 135 IPR045269 GO:0004674|GO:0006914
Cca03g00147 144 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Cca03g00147 144 ProSiteProfiles Protein kinase domain profile. 8 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00147 144 SUPERFAMILY Protein kinase-like (PK-like) 8 134 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00147 Cca-Chr3 2110926 2114226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00147 14 134 CBL-interacting serine-threonine protein kinases AT2G30360 37.398 1.67e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Cca03g00147 Pkinase 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00147 - - gmx:100787409 240.35