Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00142 ATGGCAGAACGAAGGGTTTTCACTCTCTCACAGGTTTCCCAACACAAATCCAACAAAGACTGCTGGGTGGTCATCAATGGCAGAGTGTTGGACGTGACAAAGTTCTTGGAGGAACACCCGGGAGGGGAAGAAGTGATTTTAGAGGTAGGTGGGAATGATGCGACAAAGGAGTTTGATGCTATTGGACATAGCAAAGCAGCGCAAAACGTGGTCCTAAAGTACCAAGTTGGTGTTCTCCAAGGTGCCATAGTTAAAGATGTAGATTTGAAGGATGTTGTGGACAAGGAATCTAACACCAAAGAGATGAGTGCCTATGTGATCAAAGAGGATGGAAGGTCCAAGTCCCTCGCATTTTATGACTTTGTTGTTCCCTTTCTTGCTGCTGGTCTTTACATTGGTTACCGATGCCTCACCAGAGCAGACTCTATCGCTTACTAG 438 0.4589 MAERRVFTLSQVSQHKSNKDCWVVINGRVLDVTKFLEEHPGGEEVILEVGGNDATKEFDAIGHSKAAQNVVLKYQVGVLQGAIVKDVDLKDVVDKESNTKEMSAYVIKEDGRSKSLAFYDFVVPFLAAGLYIGYRCLTRADSIAY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00142 145 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 81 IPR036400 -
Cca03g00142 145 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Cca03g00142 145 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Cca03g00142 145 PANTHER CYTOCHROME B5 1 140 - -
Cca03g00142 145 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Cca03g00142 145 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Cca03g00142 145 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Cca03g00142 145 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Cca03g00142 145 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Cca03g00142 145 PANTHER CYTOCHROME B5-LIKE 1 140 - -
Cca03g00142 145 SMART Cyt_b5_2 7 80 IPR001199 -
Cca03g00142 145 Gene3D - 1 83 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00142 Cca-Chr3 2044204 2044927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00142 2 140 NADPH P450 reductases AT5G48810 41.844 5.51e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00142 - - ccaj:109797704 278.87