Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00139 ATGAAAGGAAACAATCCCTATTTCGTCGTTGTTGTCATACAAGCCATATACGCTGCTATGTTTCTTCTATCAAAAGCTGCATTCGATCATGGCATGAACAACTTCATCTTTGTCTTCTATAGACAGGCAATAGCAACCATCTTTTTGACCCCTTTCACTTTCTACTTCGAGTGGAAAACTGCACCACCTATGTCTTTTTGGACCTTCTGCAAGATCTTCTTCCTTTCTTTCTTCGGGATTACTTTAAGCTTGGACATATATGGTATTGGCCTTATTTACACCTCAGCAACTTTGGCTGCTGCTACTACAAACTGTCTTCCAGTTATCACCTTCTTCTTGGCGCTCCTACTAAGGATCGAGAGTTTGAAAATAAAGACGAGGTCTGGGATGGCCAAGTTAATAGGCATTGTGGGATGCTTGGCTGGGGCAGCAACCCTTGCCTTTTATAAAGGTCCTCCGTTGAAACTTTTAAGCCATTATCACCTTTTGGATCACCATAAAACCCTACAACATCAAGGTCATGCCCCGTCTGGCGCATGGATCAAGGGTTGCTTCCTCATGCTTCTCTCCAACTCCTGTTTCGGACTCTGGCTTGTACTACAGGCTTTTATTATAAAAGGGTACCCTTCGAAGCTGCTATTCACAACTCTTCAGTGTTTCTTAAGCTCAATTCAGTCTTTTGTCATTGCCTTCGCCGTAGAAAGAGACATTGAGCAATGGAAGTTGGGTTGGAATGTCAGGCTCCTCGCCGTAATATACTGTGGAATTATGGTGACCGGTGTGACATATTACTTACAAACATGGGTCATAGAGAAGAAAGGACCTGTGTTTCTAGCCATGTCAACTCCACTTGCTCTTATTATTACAATCTTCGCCTCTGCAACCGTCTTGGGTGAAATAATCAGTTTGGGAAGCCTTTTAGGAGGGTTGGTATTGGTTCTAGGACTATACAGCGTACTGTGGGGAAAGAGCAGGGAGCAAATGGCAAAAGCCACCATTGACGTGGAGCAGGCACCGGTTTATAAGAATAATGATATGTGA 1041 0.4352 MKGNNPYFVVVVIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAIATIFLTPFTFYFEWKTAPPMSFWTFCKIFFLSFFGITLSLDIYGIGLIYTSATLAAATTNCLPVITFFLALLLRIESLKIKTRSGMAKLIGIVGCLAGAATLAFYKGPPLKLLSHYHLLDHHKTLQHQGHAPSGAWIKGCFLMLLSNSCFGLWLVLQAFIIKGYPSKLLFTTLQCFLSSIQSFVIAFAVERDIEQWKLGWNVRLLAVIYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLALIITIFASATVLGEIISLGSLLGGLVLVLGLYSVLWGKSREQMAKATIDVEQAPVYKNNDM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00139 346 PANTHER WAT1-RELATED PROTEIN 7 330 IPR030184 GO:0016021|GO:0022857
Cca03g00139 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
Cca03g00139 346 PANTHER WAT1-RELATED PROTEIN 7 330 - -
Cca03g00139 346 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Cca03g00139 346 Pfam EamA-like transporter family 7 140 IPR000620 GO:0016020|GO:0016021
Cca03g00139 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00139 Cca-Chr3 2026224 2031514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00139 1 254 Nodulin-like Gene Family AT5G64700 61.628 2.53e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00139 - - gmx:100804562 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02229 09 47501715 47508762 Cca03g00139 03 2026224 2031514 PCT