Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00138 ATGAGTGAACTAAAGCCATATCTAGCAATGTTTATAATACAATTGATGTATTCAGGGCTTACCCTGTTGTCCAAGGCTGCGTTTAACGGGGGAATGAATACATACGTGTTTATCTTTTATAGACAACTTACTGGAACCCTTATTCTGGTCCCTCTGGCCTTGATACTTGAAAGGTATATGTTTTTCTTTCCTAGTACAGTGAAGCTTAGGTCCATATATAATGTTAATGTGTTGTTTTTCAGAGTGAGTCTGAGTTTAAATATACAAGCTATTGCCCTTGCTTACACGTCTGCCACGTTGGCCGCAGCAATTGTTAATTCCCTTCCCGCATCTACCTTCTTCTTTGCTGTGCTTCTCAGAATGGAGAAGGTAAATATAAGGACGAAATCTGGAATTAAAAAGATAGCAAGTGTATTACTGTGCCTGCTTGGTGTAGCGACCCTAGCATTTTACAAGGGACCCCAGTTAAGGACTACGCATCACGTCTTATCCAGATACCACAATCACCAAAATCCACACCATCAAGATCATTTTTCATCTGGCAAAAGATGGATATTGGGTTCTTTACTCTTGTTCTTAAGCGTCATCATTTGGAGTTTTTGGCTTACAATTCAGGCTCAAATTCTTAAAAGCTACCCTGCAAAACTAAAGTTCACGAGCCTTCAGTGCCTATCAAGTTCAATTCAGTCATTTGGTATTGCTATAGCTTTTGAAAGAGATATTCAGCAGTGGAAGTTGGGTTGGAACATGAGACTACTCGCAGTTGTTTACTGTGGGGCACTGGTGACTGGGGTCGCCTACTACTTGCAAACTTGGGTGATCGAAAAGAGAGGGCCAGTTTTTTCAGCAATGTGGAGCCCACTCAGTTTTATAATTGCTACAACAGGTTCTGTGTTGATCTTGGGCGAGCCCCTACGTTTGGGAAGCGTTCTGGGAGGGATTCTGCTTGTTTTAAGTCTCTATAGTGTTTTGTGGCCAAAAAGCAAAGAAGGAATGACTCATCAAACTTCTTTACCCCTTCAATCAGTTAAAGAATGTGAAGAGGTCAAAACATAG 1056 0.411 MSELKPYLAMFIIQLMYSGLTLLSKAAFNGGMNTYVFIFYRQLTGTLILVPLALILERYMFFFPSTVKLRSIYNVNVLFFRVSLSLNIQAIALAYTSATLAAAIVNSLPASTFFFAVLLRMEKVNIRTKSGIKKIASVLLCLLGVATLAFYKGPQLRTTHHVLSRYHNHQNPHHQDHFSSGKRWILGSLLLFLSVIIWSFWLTIQAQILKSYPAKLKFTSLQCLSSSIQSFGIAIAFERDIQQWKLGWNMRLLAVVYCGALVTGVAYYLQTWVIEKRGPVFSAMWSPLSFIIATTGSVLILGEPLRLGSVLGGILLVLSLYSVLWPKSKEGMTHQTSLPLQSVKECEEVKT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00138 351 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Cca03g00138 351 Pfam EamA-like transporter family 5 146 IPR000620 GO:0016020|GO:0016021
Cca03g00138 351 PANTHER WAT1-RELATED PROTEIN 5 337 IPR030184 GO:0016021|GO:0022857
Cca03g00138 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
Cca03g00138 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 329 - -
Cca03g00138 351 PANTHER WAT1-RELATED PROTEIN 5 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00138 Cca-Chr3 1989148 2011155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00138 1 258 Nodulin-like Gene Family AT5G64700 49.242 7.40e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00138 - - vun:114162763 459.914