Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00074 ATGGATCTTGAATCCAGCAAGTGTTGGGACACCTCAAAGGACTCTTGGAAGACCATTCTGATCTTGGCATACCAAAGTCTTGGTGTGGTATATGGGGACTTGAGCATTTCTCCATTGTATGTTTACACGAGCACATTTGCGGAAGATATTGAACATTCAGAGACCAACGAGGAGATTTTTGGTGCCCTTTCTTTTGTCTTCTGGACTCTGACATTGGTGCCACTATTCAAATACGTTTTTGTGGTTCTTCGAGCTGATGATAATGGAGAGGGGGGTACATTTGCTCTATATTCTTTGATTTGTAGGCATGCCAAAGTTAGTCTCCTACCAAATCGACAACATGCTGATGAAGCACTTTCTACATATAAGATGGAGGAGCCTCCAGCGAAAGATACTTCTAGAGTGAAGATGGTGCTTGAGAAATACAAGGCCTTGCATACAGCTCTGCTAATTGTGGTTCTTCTGGGCACTTGTATGGTAATAGGGGATGGACTACTTACCCCAGCTATTTCTGTTTTCTCAGCAGTATCTGGTCTTGAGGTATCTATGTCCAAGAAACACCACCAGTATGCTGTGATTCCCATCACTTGCTTCATACTGGTGTGTTTGTTTGCACTCCAACACTATGGTACACATAGGGTGGGATTCCTTTTTGCTCCGATCGTATTGGCATGGCTGTTGTGCATCAGCACACTTGGTTTATATAATATATTCAAATGGAATCGACATGTATATAAAGCTCTTTCACCATATTATATGTTCAAGTTCTTGAAGAAGACAAGGATAAGTGGATGGATGTCTTTGGGAGGAATATTGTTGTGCATAACAGGCTCAGAAGCCATGTTTGCTGATCTTGGCCATTTCTCATATATGGCCATTCAGATTGCATTCACCTTTCTGGTATATCCTGCGCTTATATTGGCATATATGGGTCAAGCTGCTTATTTGTCAAATCATCATGATTCCGAACTCCAAATCAGTTTCTATGTCTCAGTTCCAGAAAGTGTGAGGTGGCCAGTGCTTATCTTAGCTATTCTAGCTTCTGTTGTGGGAAGCCAAGCAATCATCAGCGGAACATTTTCTATCATAAACCAGAGCCAATCTCTAGGTTGCTTCCCAAGAGTTAAGGTTGTTCACACATCTGACAAGATACATGGTCAGGTCTACATTCCTGAAATTAATTGGATACTCATGATCCTCTGTATTGCTGTGACCATTGGATTTAGGGACACAAAGCACATGGGAAATGCTTCAGGGTTAGCTGTGATGACCGTGATGCTGGTAACAACATGTCTCACCTCCTTAGTAATGATAGTTTGTTGGCATAAACCCCCTATTCTAGCCCTTTGTTTCCTACTGTTTTTTGGATCTATTGAACTGCTGTATTTCTCAGCTTCACTCACAAAGTTTTGTGAGGGTGCCTGGTTACCTATCCTGCTGGCCCTCTTCCTCATGATCATAATGTTCCTTTGGCACTATGCAACCATCAGAAAATATGAATATGACCTTCACAACAAGGTCTCACTAGATTGGCTTCTAGCCTTAGGTCCAAGCTTGGGAATTGCTAGAGTCCCAGGAATAGGCCTAGTGTTCACTGACCTAACCACTGGCATCCCAGCAAACTTCTCCCGCTTTGTCACCAACCTCCCTGCATACCACCGCATCCTTGTTTTCGTGTGTGTGAAGTCAGTGCCTGTCCCTCATGTCCCTGCTGCTGAGAGGTATCTAGTAGGCCGTGTCGGACCTTCAGCTCATCGGTCCTACCGGTGCATAGTCCGATATGGATACCGTGATGTTCATCAGGATGTTGATTCCTTTGAGTCTGAACTAGTAGCAAGGCTTGCTGATTTCATCCAGTATGATTGGTACCGGTCTAGGAGGAGTAGCATGAGCATTGAAGATGATGCGTCACACTCTAATGAATCATCAAGTCACAGACTAACTGTGATTGGAACAACTGGTTTCTCCATCCAGCCAGGATATGAGAGTGGTGGGGAGAGTGTGCAGCAAGCAAGTGTATCTGTTGGCTTCCCTACAGTTCACAGCGTGAGTGATGTGATTGAGATGGAACCAATGGATGTGACTGAGAGGAGAGTGAGGTTTGCTATTGATGATGAGCCTGAAAGTGATGCAAGGTCTGAGGTAGGAGTGCAAATGCAGGAAGAGCTGGAAGATCTTTATGCAGCTCAAGAAGCTGGGATTGCCTTCATTCTTGGACATTCTCATGTAAGAGCAAAGCAAGGCTCATCTGTCCTAAAGAAATTGGCACTTAACTATGGCTACAATTTCCTGAGAAGAAATTGTAGAGGCCCAGATGTGGCACTTAAGGTTCCCCCAGTTTCTCTTTTGGAGGTTGGCATGGTTTACATTGTGTAG 2376 0.4398 MDLESSKCWDTSKDSWKTILILAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHADEALSTYKMEEPPAKDTSRVKMVLEKYKALHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLAWLLCISTLGLYNIFKWNRHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYMAIQIAFTFLVYPALILAYMGQAAYLSNHHDSELQISFYVSVPESVRWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVMIVCWHKPPILALCFLLFFGSIELLYFSASLTKFCEGAWLPILLALFLMIIMFLWHYATIRKYEYDLHNKVSLDWLLALGPSLGIARVPGIGLVFTDLTTGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVPAAERYLVGRVGPSAHRSYRCIVRYGYRDVHQDVDSFESELVARLADFIQYDWYRSRRSSMSIEDDASHSNESSSHRLTVIGTTGFSIQPGYESGGESVQQASVSVGFPTVHSVSDVIEMEPMDVTERRVRFAIDDEPESDARSEVGVQMQEELEDLYAAQEAGIAFILGHSHVRAKQGSSVLKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00074 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca03g00074 791 TIGRFAM kup: potassium uptake protein 22 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca03g00074 791 Pfam K+ potassium transporter 24 598 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca03g00074 791 PANTHER POTASSIUM TRANSPORTER 2 1 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00074 Cca-Chr3 1048563 1053615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00074 1 791 Inorganic Solute Cotransporters AT2G40540 77.391 0.0 1261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00074 K03549 - gmx:100806122 1515.75