Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00037 ATGGTGGCAATGGGGTTGGCAGCACAAACCCGCACacagttacagttacagttagagaaacacgtgacagAGGGTTTTGGTTCAAAATCCATGGAATTGAAATGGGTAAGGCGAAGAAGAACCACCAAAACCTCTCACACGAAACCACTCTTCCCAATTTACATTTCCACCGACCCGTGCCACGTCGATCCGCACCGTCTCCGAGACCTATTTGCCGATTGCAACTACTCTACCCGACCCGAACCCGAAATCGTGGATATACGCAAACTCGGCGTTGCTCTGTCTCATAGTGCCGTGATTATCTCTGTCTTCTGCAACCCCCAACATGTAAACGCCGTTCCCAATCACAATTCCCCAATTGCCGATTTCTTCACGCCGGTTTCTCCTTCTCGCGACCAATTGATCGGCTTTGGCCGTGCCGTTTCCGATTATGGCCTCACTGCTTCTATTTACGATGTCATGGTTATTCCTTCCATGCAGAGAATGGGAATTGGTCAGATGATAGTTAAAAAAATTGTGAGAATGCTTACAAGTAGAGACGTCTACGACATAGCAGCCCTTTGCTCTGAGAATGAAAGGTTGTTATTTTTTAAGGCGTGTGGATTTGGAGACGACATTTTGGGCTCTACTACCATGATGGACCTACGAATCTTCAAGGACAGTAATGTAAAGAGTCAAGCTACATTCTGTAAACAATTAGCAACAACTAGATTGTTGCTTGATCAGCTAGAGGAGTGTAAACGTGGGAAATGTTATGGCTTCTGGAAGACCACATATTTTGTACAGAGCACATCTTAA 798 0.4373 MVAMGLAAQTRTQLQLQLEKHVTEGFGSKSMELKWVRRRRTTKTSHTKPLFPIYISTDPCHVDPHRLRDLFADCNYSTRPEPEIVDIRKLGVALSHSAVIISVFCNPQHVNAVPNHNSPIADFFTPVSPSRDQLIGFGRAVSDYGLTASIYDVMVIPSMQRMGIGQMIVKKIVRMLTSRDVYDIAALCSENERLLFFKACGFGDDILGSTTMMDLRIFKDSNVKSQATFCKQLATTRLLLDQLEECKRGKCYGFWKTTYFVQSTS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00037 265 Pfam Acetyltransferase (GNAT) family 131 202 IPR000182 GO:0016407
Cca03g00037 265 CDD NAT_SF 132 181 - -
Cca03g00037 265 Gene3D - 51 205 - -
Cca03g00037 265 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 85 222 IPR000182 GO:0016407
Cca03g00037 265 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 28 219 - -
Cca03g00037 265 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 28 219 IPR039143 GO:0004343|GO:0006048
Cca03g00037 265 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 104 202 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00037 Cca-Chr3 637301 639216 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca03g00037 Acetyltransf_1 4.3e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00037 - - gmx:100792685 307.375