Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g00036 | ATGGAGGAGGTCTTTGTTGTGGCAATGAAAGTGGCTTCTTCAGTTGCTGTTGTGGGGATTCTAAGCTGGATACTCTATGTGTATGGCAATATGTGGCACAAGTCTCAAAGGGTTAGAAGGAGGCTACAAATGCAAGGTATAAAAGGGCCTCCACCTTCTTTTCTACATGGGAACCTGCCTGATATGCAGAGAATTCAAGCTCAGGTTAGCATGGCCAAATCTTCATCCTCCAACCATTCTGATCAGTTTCTGGCACATGACTACACTGCAACCCTCTTCCCCTACTTTGAACACTGGAGGAAACAATATGGTCTACTGTACACTTACTCCACAGGGATGAAGCAACACCTATATGTGAACCAACCGGATCTAGTGAGAGAAATGAATCAATGTATCACTTTGGATTTGGGTAAGCCTACTTACATAACCAACAAACTTGCACCAATGCTTGGCAATGGCATTTTGAGAGCCAACGGCCAAAGTTGGGCACAACAAAGGAAACTTGTTGCAGCTGAGTTCTTCATGGACAAAGTTAAGGGTATGGTGGACCTAATGATTGAGTCAGCTCAGCCACTACTAGTAAAATGGGAGCAACTTATTGAGAGTCAAGGAAGTGGCACAGCTGAAGTTAAAGTGGATGTGGATTTGAGGGGCTTCTCAGCTGATGTTATTTCAAGGGTTTGCTTTGGCCATTCTTATTCCAAAGGAAAGGAAGTCTTCTCAAAGCTTAGAAGCATACAGAAGGCCATGTCTAAACAAGGTGGCTTCCTTTTTGGCCTCAGCAGTTTCCGCGACAAACTGAATTTCTTGTCAAAGAAGCAAAACGAAATTGCAAATTTGGAGAGAGAGATAGAGTCACTGATCTGGGAGTTAGTGGAGGAACGGAAGCGTGAATGCTCAGAGACATCTTCATCAGATAAGGATTTGATGCAGTTGCTATTGGAAGCAGCCATAACTGATCAAAGTCTGGGGAAGGACTTTTCCAAGCGATTCATTGTTGATAACTGCAAAAACATTTACTTTGCTGGCCATGAAACCACTGCTGTTGCAGCCTCTTGGTGTCTAATGCTTCTTGCTTTGCACCCAGAATGGCAAACTCGTATAAGGAATGAGGTGGCTCAACTTTGCCCCAATGGCATACCAGATGCAGATTCTCTCCCTTTATTGAAAACGGTGACTATGGTGATTAAAGAAGTGCTACGTTTATACCCACCAGCAGCCTTTGTGTCAAGGGAGGCATATGAAGATATCCAAATAGGAAGCCTCAATGTTCCTAAAGGCGTGTGTCTATGGACCTTGATCCCAACACTGCACAGAGACCCTGAAATTTGGGGACCAGATGCAAATGAGTTTAAACCAGAAAGGTTCAGTGAGGGTGTCTCTAAGGCTTGCAAGTTTCCTCATGCTTATGTGCCATTTGGATTAGGTACTCGCTTATGCTTGGGAAAGAACTTTGCAATGGTTCAGTTGAAGGTTGTGCTAGCCCTTATCATCACCAAGTTTAGCTTCTCTCTGTCTCCTAGCTATAGTCACTCTCCGGCATATAGAATGATCGTAGAGCCAGGACATGGTGTATATATTCTCATTCAGAAGATTTGA | 1599 | 0.4384 | MEEVFVVAMKVASSVAVVGILSWILYVYGNMWHKSQRVRRRLQMQGIKGPPPSFLHGNLPDMQRIQAQVSMAKSSSSNHSDQFLAHDYTATLFPYFEHWRKQYGLLYTYSTGMKQHLYVNQPDLVREMNQCITLDLGKPTYITNKLAPMLGNGILRANGQSWAQQRKLVAAEFFMDKVKGMVDLMIESAQPLLVKWEQLIESQGSGTAEVKVDVDLRGFSADVISRVCFGHSYSKGKEVFSKLRSIQKAMSKQGGFLFGLSSFRDKLNFLSKKQNEIANLEREIESLIWELVEERKRECSETSSSDKDLMQLLLEAAITDQSLGKDFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLALHPEWQTRIRNEVAQLCPNGIPDADSLPLLKTVTMVIKEVLRLYPPAAFVSREAYEDIQIGSLNVPKGVCLWTLIPTLHRDPEIWGPDANEFKPERFSEGVSKACKFPHAYVPFGLGTRLCLGKNFAMVQLKVVLALIITKFSFSLSPSYSHSPAYRMIVEPGHGVYILIQKI | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g00036 | 532 | Gene3D | Cytochrome P450 | 31 | 532 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 7 | 527 | - | - | |
| Cca03g00036 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 473 | 482 | IPR017972 | GO:0005506|GO:0016705 | |
| Cca03g00036 | 532 | PRINTS | P450 superfamily signature | 342 | 359 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | P450 superfamily signature | 394 | 405 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | P450 superfamily signature | 471 | 480 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | P450 superfamily signature | 480 | 491 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | E-class P450 group I signature | 100 | 119 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | E-class P450 group I signature | 219 | 237 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | E-class P450 group I signature | 331 | 348 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | E-class P450 group I signature | 351 | 377 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | E-class P450 group I signature | 470 | 480 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PRINTS | E-class P450 group I signature | 480 | 503 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | PANTHER | CYTOCHROME P450 714A1-RELATED | 7 | 527 | - | - | |
| Cca03g00036 | 532 | Coils | Coil | 270 | 297 | - | - | |
| Cca03g00036 | 532 | Pfam | Cytochrome P450 | 90 | 510 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Cca03g00036 | 532 | SUPERFAMILY | Cytochrome P450 | 87 | 529 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca03g00036 | Cca-Chr3 | 618118 | 627728 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Cca03g00036 | 124 | 529 | Cytochrome P450 | AT5G24900 | 57.664 | 1.80e-178 | 506 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g00036 | K20661 | - | gmx:100815776 | 977.622 |