Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00011 ACAGTTGTGGTGATATCTTTTAAACCATGGGGAGTGATACAATTTGGATCCAAAAACAAGATTTTGGAGAGAGTGAAATTTGTGGAACAAACAGAAACATTGCTAAGGGGGATACAATATGAGGATATTCTTGATGAATTAAATACTACAGTTCTATCTGTGGATTGTGAAAATTATGATTTAAATGGACTGTTAGCTTCCATTTCTTCCGAAAATTTGTATGATTGGAATTTCAAATCTGTTAATGTTGACAACTTTGAAATGCTATTGGAAAATCCTTGTTCCTTTGCAAATCTTAATGATTCCTTCCCTTCCATGGGTACGATTCTTGAAGAAGGGACAACACCAATGCTTGGATTTTCCTCTCATCATTGCGACCAATTGACACCTTCCATAGAAGCTCAAGCACTATTTTCAGATAGGGATAGTATTGAATACTCTTTAAACAACTTATTTGCTAGAAAACCCAGTTTTGGCACATGGAGTGGCGAAATTTCATCATTGGATTCACAGGGGCAACAACCGGTATCTGAAAGAAGGATTCAAGTTGTTGCGGATGTGCACTGTAAAGAGGCAAATGCATTGTGTAGTAACAAAGTTGCAACTCAGAATTCAAAATTGACCTCTTTATACAGTGTGAATAGACTGTTAGACCCAATAGGCCAATTTCAAGACCACATGGGAAATTCACTAGATATCCAACATTCTGCTGAATCTAGTATTGTAAGAAAAGTTAATTATCCTGATAGTTTCAGTATGATGCATGAACTCTCCAAGGACTTAGAACAAGTCGATGCCTTAGAAGAATTTTCAAATTTCTTTTGCATGGATGATTTTTGCCACTTGTTAGCTCCTTCTCCAGACCCCAGCATTTATGGAACAATGACTTCATTGGACGAGTCACTAGAATTTAATCCCACTTCTTTTGGTCTGGTTGATAATAGTGCCACTGATTTTGTTTCAGTTACATGTCAAGCTGTTCAAAATAATAGTTGCATCATAGCTTCAACCAACTTGGATGGTCAAGAAACATCTACAGTCATGCATAGTTCTGAAAACAGTCTCTTAGATATCATGGGACATGATTTAAGCTTTGACCAAGCTAAGGATTGGTGGGGTAGTATGGCTATGCTTCCGCCGGTGGTGAGTGTTGCTACTACTGTTACTACTACTGACACTGCTTTCTCTGATTGTGCTCCAGAGTTGAATGTTGGTACAGTAGGTGAATCTAGGAAGAGATTATTCTCAGAGTTGGGAATTGAAGAGTGTTTGAATGGTTCTAATTTTGAAGATCAATTATCAACCAATAGAAAGCAGAGGACAGAACATTCACCTGTGAATAGAAATTCAAAAAAGCACTTGGTAAGTCAGACTTTGGCTCAGCCTGTTCCTAAATTGGACATGACAAACAATCTTTTGCACAAGAAAGAGATATTTCAAAAGTCAGTGGAACAAAATAAGGTCACCAAGAAGAGGGCTAATCCAGGTGAAACAAGTAGACCAAGACCGAAGGATCGTCAGAAAATTCAAGACTGCATTGGAGAGTTGAGAGGGATCATCCCCAATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGAACCATCAGGCACATGATATTCTTACAAAGCATCACCAAGTATGCAGACAAGCTAAAAGAACCCAATAAGCCTAAGCTCATTGAGAGGGCAAATGGGAAGGTTAATAAAGACAGTGAAGTGGGAGATAGCAAAAAATGTGGTAGTGGTGTTACATGTGCATTTGAAGTGGAAGGTCAAACAATGTTATGCCCAATTATAGTGGAGGATATGGGCCCACCTGGCCAAATGCTTATAGAGATGCTTTTTGAAGAGCAGGGTTCCTTCCTTGAGATAGTGGACATCGTTGGAGGATTTGGGTTGAATATCTTGAAGGGAAAGATGGAAATCAGGGATAATAAGATATGGGCACGCTTTATAGTTGAGGCGAACAAACATGTAACGAGGATAGATGTATTTTGGTCCCTCATCCATATTCTACAGCAGAAAAACACATCTGGAACGGATTCAGATAATAAGCTTTGTAATATTAACGATGTTGGCTTCTCTTCAATGGACAAATTTGCAAAAAACAGACATGCTAGTACTACCCATGGTCAAGATACTTGGATGACTCTTCTGAAAGATTTGAGTCACAAGTGGGGCACCAAACACTTCCTTTTTCATTCATCAATTGCTTCTCCTGAGTCTTCGGTTGGTAACCCATCTTGCTTACAAAGGCCCGCATGGTCCAGGCCCACAAATGTTAACCTGCACAATGTCTCATCGAGCGTGATCACTTGGAAACGCAGCTACTCATTTCCATTGACCACCAGGTGTGGTTTTTGTGATCGTGCTTGGGAATTCTGTTTGTGTGCATTCATTCTGCAGAGAGAAATGACAACGCTGTCAGATATTGGAGTTGCAGCCGCCATAAACATTTCAAGTGCATTGCTTTTCTTTTTAGCATTTGCTATTTTGAGGCTTCAACCTTGGAACGATCGAGTGTACTTCCCAAAATGGTATTTGAAGGGTTTAAGAACAGATCCAGTTCATGGAAGAGCGTTTGCGAGCAAGTTCATCAATTTAGACTGGAGGGCATATTGTGGATTTTTCAATTGGATGCCAGAAGCACTTAGAATGCCAGAACCTGAGCTTATTGACCATGCAGGATTAGACTCTGTTGTTTACTTGCGGATTTACTTGATAGGGCTTAAAATCTTTGTTCCTATAGCGTTCCTGGCTTGGACTGTTCTGGTTCCTGTCAATTGGACAAGTAGTGGTCTAGAAGGTGCCCAGATTAAGAACATAACTTCCAGTGACATTGATAAACTCTCCGTTTCAAATGTCCATAGTCGATCTGAAAGGTTTTGGGGGCACATAATAATGGCTTATGCATTTACCTTTTGGACTTGCTATGTTTTGCTAAAGGACTATGAAAAGGTTGCATCAATGAGACTTGGCTTTCTTGCAGCAGAAAGACGTCGTCCTGATCAGTTTACGGTGCTTGTAAGAAATATTCCACCAGACCCCGATGAATCTGTGAGTGACCTTGTGGAGCACTTCTTTCTGGTCAATCATCCAGGTCACTATCTGACTCACCAGGTTGTTTACGATGCAAACAAACTTGCTAAGTTCGTGAAAAAGAAAAAGAAGTTGACGAATTGGCTTGTCTATTATCAAAATAAACTTGAAAGAACATCAAAAAGACCTGAAATTAAGACTGGTTTCCTTGGTCTTTGGGGAAAGAAAGTAGATGCTATTGATTATCACATCACTGAAATTGACAAGTTGTCAAATGAAATTGTTGTAGAGAGGGAAAAGGTCATAAATGATCCGAAGTCTATCATGCCTGCTGCATTTGTTTCATTTAAATCGCGATGGGCTGCTGCTGTCTGTGCACAAACTCAGCAATCCAGAAATCCAACACTTTGGTTGACTGAATGGGCTCCGGAGCCTCGAGATGTATATTGGCGAAACTTGCCAATTCCATATGTTTCTCTCACTGTCAGGAGGTTAATCATAGCTGTTGCATTCTTTTTTCTCACTTTCTTTTTTATGATCCCCATTGCATTTGTTCAAACTCTTGCAAGTCTGGATGGAATCCAGAAAGCAGCACCATGGCTGAAGCCACTTGTCAAAATCCCTTTCATTAAGTCATTTATTCAAGGTTTTCTACCCGGTATTGTGTTGAAGCTGTTCCTTATCTTCTTACCAACAATATTGATGATCATGTCTAAATTTGAAGGCTTTGAATCTATATCATCTCTGGAGAGAAGATCAGCTTCTAGACACTATCTTTTCAATTTTGTGAATATATTTCTTGGGAACATACTTACTGGAACAGCATTTCAACAGCTGAGCTCTTTCATTCACCAACCAGCCAACCAATATCCTGTAACAATAGGCACTGCTATTCCTTTAAAAGCAAGTTTCTTCATCACTTACATAATGGTTGACGGATGGGCCAGTATAGCTGCAGAAGTTTTGATGTTGAAACCTCTAATATTTTATCACTTGAAGAATTTCTTCTTGGTCAAAACTGAAAAAGACAGGGAGGAGGCCATGGATCCAGGGAGTATTGGTTTCAACACCGGAGAACCTCGTATACAATTGTACTTTTTGTTGGGTCTTGTATATGCTGCAGTGACACCTGCTGTTCTTCCTTTCATCATAGTTTTCTTTGGCCTGGCATATGTTGTGTTCCGTCATCAGATCATTAATGTATATAATCAAGAGTATGAAAGTGGTGCAGCATTCTGGCCTGATGTCCACTTCCGTATTGTGTTGGCACTGATAGTGTCACAGATAGTTCTGATGGGGCTCCTCACCACCAAAAAAGCTGCATCATCAACTCCATTTCTCATTGTGCTCCCAATACTAACCATATGGTTCCATAGGTACTGCAAAGGCCGCTTTGAACCCGCATTTGTGAAATTTCCCTTACAGGAAGCGATGATGAAAGATACATTAGAACGAGCAACAGAACCTAACCTGAACTTGAAAGGCTATCTTCAGAATGCCTATGTTCATCCTGTTTTTAAGGACAGCATGGATGTTGACGACGACGACGAAGAGATCCTTAGTATGGATTTGGAAACTGAAAGTGCGACAGTGCGCACAAAACGCCAATCTCGAAGGAACACCCCATTGCCCAGCAAAAATAATGATGCATCATCCCTCTCTTTGGGTAGAAATCAATCAGAGAGAGATGCATATAGAGGCATCATGGGATTGTGTGGGTCAATGACTGTGCAATTCCTTCACATTCACAAATACAAtcctcttccttcttcttcttcttcttctctctCCAACAACAGCATGTGCTCCCTCAAATGCCGTTTCAGATCGCCCTTCGATTCATATTCCGTCGCTTGCGAGGCTTTTTCCGAACCCCACCCTCCCCTCTTTGCTATTTGA 4941 0.4005 TVVVISFKPWGVIQFGSKNKILERVKFVEQTETLLRGIQYEDILDELNTTVLSVDCENYDLNGLLASISSENLYDWNFKSVNVDNFEMLLENPCSFANLNDSFPSMGTILEEGTTPMLGFSSHHCDQLTPSIEAQALFSDRDSIEYSLNNLFARKPSFGTWSGEISSLDSQGQQPVSERRIQVVADVHCKEANALCSNKVATQNSKLTSLYSVNRLLDPIGQFQDHMGNSLDIQHSAESSIVRKVNYPDSFSMMHELSKDLEQVDALEEFSNFFCMDDFCHLLAPSPDPSIYGTMTSLDESLEFNPTSFGLVDNSATDFVSVTCQAVQNNSCIIASTNLDGQETSTVMHSSENSLLDIMGHDLSFDQAKDWWGSMAMLPPVVSVATTVTTTDTAFSDCAPELNVGTVGESRKRLFSELGIEECLNGSNFEDQLSTNRKQRTEHSPVNRNSKKHLVSQTLAQPVPKLDMTNNLLHKKEIFQKSVEQNKVTKKRANPGETSRPRPKDRQKIQDCIGELRGIIPNGGKCSIDSLLDRTIRHMIFLQSITKYADKLKEPNKPKLIERANGKVNKDSEVGDSKKCGSGVTCAFEVEGQTMLCPIIVEDMGPPGQMLIEMLFEEQGSFLEIVDIVGGFGLNILKGKMEIRDNKIWARFIVEANKHVTRIDVFWSLIHILQQKNTSGTDSDNKLCNINDVGFSSMDKFAKNRHASTTHGQDTWMTLLKDLSHKWGTKHFLFHSSIASPESSVGNPSCLQRPAWSRPTNVNLHNVSSSVITWKRSYSFPLTTRCGFCDRAWEFCLCAFILQREMTTLSDIGVAAAINISSALLFFLAFAILRLQPWNDRVYFPKWYLKGLRTDPVHGRAFASKFINLDWRAYCGFFNWMPEALRMPEPELIDHAGLDSVVYLRIYLIGLKIFVPIAFLAWTVLVPVNWTSSGLEGAQIKNITSSDIDKLSVSNVHSRSERFWGHIIMAYAFTFWTCYVLLKDYEKVASMRLGFLAAERRRPDQFTVLVRNIPPDPDESVSDLVEHFFLVNHPGHYLTHQVVYDANKLAKFVKKKKKLTNWLVYYQNKLERTSKRPEIKTGFLGLWGKKVDAIDYHITEIDKLSNEIVVEREKVINDPKSIMPAAFVSFKSRWAAAVCAQTQQSRNPTLWLTEWAPEPRDVYWRNLPIPYVSLTVRRLIIAVAFFFLTFFFMIPIAFVQTLASLDGIQKAAPWLKPLVKIPFIKSFIQGFLPGIVLKLFLIFLPTILMIMSKFEGFESISSLERRSASRHYLFNFVNIFLGNILTGTAFQQLSSFIHQPANQYPVTIGTAIPLKASFFITYIMVDGWASIAAEVLMLKPLIFYHLKNFFLVKTEKDREEAMDPGSIGFNTGEPRIQLYFLLGLVYAAVTPAVLPFIIVFFGLAYVVFRHQIINVYNQEYESGAAFWPDVHFRIVLALIVSQIVLMGLLTTKKAASSTPFLIVLPILTIWFHRYCKGRFEPAFVKFPLQEAMMKDTLERATEPNLNLKGYLQNAYVHPVFKDSMDVDDDDEEILSMDLETESATVRTKRQSRRNTPLPSKNNDASSLSLGRNQSERDAYRGIMGLCGSMTVQFLHIHKYNPLPSSSSSSLSNNSMCSLKCRFRSPFDSYSVACEAFSEPHPPLFAI 1646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00011 1646 MobiDBLite consensus disorder prediction 1549 1572 - -
Cca03g00011 1646 MobiDBLite consensus disorder prediction 483 507 - -
Cca03g00011 1646 MobiDBLite consensus disorder prediction 1537 1572 - -
Cca03g00011 1646 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 811 1558 IPR045122 GO:0005227
Cca03g00011 1646 Pfam Cytosolic domain of 10TM putative phosphate transporter 1005 1166 IPR027815 -
Cca03g00011 1646 Pfam Calcium-dependent channel, 7TM region, putative phosphate 1177 1449 IPR003864 GO:0016020
Cca03g00011 1646 PANTHER PROTEIN OSCA1 811 1558 - -
Cca03g00011 1646 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 493 542 IPR011598 GO:0046983
Cca03g00011 1646 Pfam Late exocytosis, associated with Golgi transport 812 983 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00011 Cca-Chr3 236806 255481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00011 475 690 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 47.964 1.52e-55 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00011 K21989 - gmx:100784781 1405.19