Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00007 ATGCCGAATCTTACGAGTCCTAGATTTAACCTCAATTTTTTGGTGCCTCTCTTGGTCACTCTGGTCCAAATCAACGCCAAGGTTCAATGTTACCAATACAAAGTTGGAGATCTAGATTCCTGGGGAATCCCCACTTCAACAAATAATCAAGTCTACGACAAATGGTCCAAATATCACAACCTCACCATTGGTGACTCTCTCCTATTTTTATACCCACCAAGTCAAGATTCAGTGATTCAAGTAACAGCGGAATCCTACAAGAGCTGCAACCTTAAAGATCCGATTTTGTACATGAACAACGGCAACTCTTTGTTTAACATTACATCAGAGGGGGACATGTATTTTACGAGTGGAGAGGCTGGACATTGCCAAAAGAACCAAAAGCTTCATATAACTGTGGGAGTTGGGGGAAACAACGCAATTGCTTCAAATTCATTGCCTGAATACGCACCCTCGTACCCAACTGTTTTTGGCAACATTCCAATGTCTCCTTCTTCCTCATCTTGCATAACTTCAAAATTTTACCTCGTGATTATTGGATTCTTCCTATGTGCACTTTCTCTCTAG 567 0.4127 MPNLTSPRFNLNFLVPLLVTLVQINAKVQCYQYKVGDLDSWGIPTSTNNQVYDKWSKYHNLTIGDSLLFLYPPSQDSVIQVTAESYKSCNLKDPILYMNNGNSLFNITSEGDMYFTSGEAGHCQKNQKLHITVGVGGNNAIASNSLPEYAPSYPTVFGNIPMSPSSSSCITSKFYLVIIGFFLCALSL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00007 188 PANTHER MAVICYANIN 13 146 - -
Cca03g00007 188 PANTHER BLUE COPPER PROTEIN 13 146 IPR039391 GO:0009055
Cca03g00007 188 Pfam Plastocyanin-like domain 48 126 IPR003245 GO:0009055
Cca03g00007 188 Gene3D - 31 144 IPR008972 -
Cca03g00007 188 ProSiteProfiles Phytocyanin domain profile. 31 135 IPR003245 GO:0009055
Cca03g00007 188 SUPERFAMILY Cupredoxins 30 133 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00007 Cca-Chr3 200346 201224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00007 14 162 Phytocyanin Superfamily AT1G64640 56.000 2.80e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00007 - - gmx:100783186 296.975