Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02920 ATGGCTTTGGAGCAGGAATTATCTTTGGGTCAGAATACGAATAACCGAAACACAAACACAAACGGCGTGGATAGTGGAGAAGAGGGAGGGAAAGCGCCGAGGCTGCCTCCTGGGGGGAAAGAACAAGAGATCCTGGTTCTAATACGGGGAAAGAGAGACGCGGAGAACAAGTTCAGGAGGGGTCGGACAGCGGGATTGGCATTCGGGTCGGGTCAGGTGGAGCCAAAATGGGCATCGGTGTCATCTTACTGCAGAAAGCATGGAGTGAACAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGTAATTTGGCCGGAGACTATAAGAAGATCAAAGAATGGGAGTCTCAGATAAGGGAGGAGGCGGAATCGTTTTGGGTGATGAGAAACGATTTAAGGAGAGAGAGGAAATTGCCCGGATTTTTCGACAAGGAGGTCTATGATATTCTTGATTCAGGCTCGCAGGCGCCGACGTTGGCACTCGCTCTTTCGTCGCCCACAGTAACGCTGCCCAAGGACAATGACACTAAAAGAGTGCCTGACCCCGAGGAGCCTCATCCTCACCTGAACCTCTATGATAGTAATCGAAGTGCCGCTGGCGAGGATGGCTTGTTCTCAGATTTTGAACAAGATGAACTCCCTGCTAAGAAACAATATCAACCACTCCTCCGCGGATGCCAGGCTGAAGGTGTGACTAACGAGAAACAGTCTACTTCAAATCCAGAAATGGGTTCTACATCTCAAGGAGAGCGGAAAAGGAAGCGGTTAGCAACTGATGGAGAGGAGGAAACATTGCAATATCAATTAATTGATGTCTTAGAAAGAAATGGCAAGATGCTAAGCGCTCAACTTGAAGCGCAGAATATAAATTTCCAGTTGGATCGGGAGCAGCGGAAAGACCATTCAAGTAATTTGGTTTCTGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCTGATAAATTATAG 969 0.484 MALEQELSLGQNTNNRNTNTNGVDSGEEGGKAPRLPPGGKEQEILVLIRGKRDAENKFRRGRTAGLAFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREEAESFWVMRNDLRRERKLPGFFDKEVYDILDSGSQAPTLALALSSPTVTLPKDNDTKRVPDPEEPHPHLNLYDSNRSAAGEDGLFSDFEQDELPAKKQYQPLLRGCQAEGVTNEKQSTSNPEMGSTSQGERKRKRLATDGEEETLQYQLIDVLERNGKMLSAQLEAQNINFQLDREQRKDHSSNLVSVLDKLADALGRIADKL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02920 322 MobiDBLite consensus disorder prediction 229 245 - -
Cca02g02920 322 MobiDBLite consensus disorder prediction 1 25 - -
Cca02g02920 322 MobiDBLite consensus disorder prediction 164 201 - -
Cca02g02920 322 MobiDBLite consensus disorder prediction 1 42 - -
Cca02g02920 322 Gene3D - 40 109 - -
Cca02g02920 322 MobiDBLite consensus disorder prediction 173 189 - -
Cca02g02920 322 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 11 322 - -
Cca02g02920 322 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 11 322 - -
Cca02g02920 322 MobiDBLite consensus disorder prediction 229 259 - -
Cca02g02920 322 Pfam Myb/SANT-like DNA-binding domain 41 127 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02920 Cca-Chr2 50707774 50711586 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Cca02g02920 Myb_DNA-bind_4 7.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02920 - - gmx:100797767 489.189