Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02917 ATGGACTGGAGTGCAGATCTTACCCCGGATAAGGAGCCATTAGATTGGAACACCAGGATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATACCTTCAAAACAAAGTAAATCCTCCGGTCAATATTTATGGAGACTTCAAATCATCTAGTATATTACTTGATGAAGGTTATCATCCAAAACTTTCAGACTTTGGCCTGTTGCTGACTTTGAGGTCTGACATATATAGTTTTGGGGTAGTCTTCCTGGAGCTGATTACTGGCCGCAAGGCCATTGACAACATCCGATCCCATGGAGAACAAAACCTTGTCACATGGCCGGCACGTCCACTGTTCAACGACCGCAGGAAGTTTCCTAAGTTAGTAGATCCACAGCTGCAGGGGCGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTGGCAACAATGTGCATTCAAGAACAATCGGCAGCACGTCCTCTCATTGGGGATGTGGTGACAGCCCTTTCTTTTCCAGCGAACCAGGCATACGACCATAGGGGAGCTGGTGAAGATAAAAGGAACAGAGATGATAAAGGTGGAGGATCTGCACGTAGATGGGATTCGGAATGA 594 0.4714 MDWSADLTPDKEPLDWNTRMKIAAGAAKGLEYLQNKVNPPVNIYGDFKSSSILLDEGYHPKLSDFGLLLTLRSDIYSFGVVFLELITGRKAIDNIRSHGEQNLVTWPARPLFNDRRKFPKLVDPQLQGRYPMRGLYQALAVATMCIQEQSAARPLIGDVVTALSFPANQAYDHRGAGEDKRNRDDKGGGSARRWDSE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02917 197 MobiDBLite consensus disorder prediction 173 197 - -
Cca02g02917 197 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 69 191 - -
Cca02g02917 197 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 4 67 - -
Cca02g02917 197 Gene3D Transferase(Phosphotransferase) domain 1 5 69 - -
Cca02g02917 197 PANTHER OS07G0668900 PROTEIN 69 191 - -
Cca02g02917 197 PANTHER OS07G0668900 PROTEIN 4 67 - -
Cca02g02917 197 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02917 197 MobiDBLite consensus disorder prediction 171 197 - -
Cca02g02917 197 Gene3D Transferase(Phosphotransferase) domain 1 70 183 - -
Cca02g02917 197 SUPERFAMILY Protein kinase-like (PK-like) 10 165 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02917 Cca-Chr2 50671458 50672216 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02917 2 165 Glycoside Hydrolase AT3G07070 51.282 1.10e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Cca02g02917 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02917 K13430 - gmx:100777987 317.39