Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02914 ATGTCATCAAGAAAAAGTGATGTTGGGATAATGGATGGTGAAAAAGAAGAGCTGATGCAAGTTGTGGAGGATGTGGATGCTTTTCTCCTTATCATAGGTGCTAATGGGGGGAAAGATGTTCCAGATTGTGTTCGTGTGCTACCCAAATTGTTTGAGGATATGTTGGATAGCTACAATTGTGGGAGAACCAAGTTTGGGGAGGATGCAACATATGACAACTCCTTCTTAGATGTTGTGAATCGCATGTACAAGCTCTCAACTAGTTGTAGTTGTAGTAATACCTTGGACCAAACTAGCTCCGTCTTAGAAAAAGCAATGTCCCTATTAGAGAAAGATCTTTGTTCTCTTTTGGAGGAACCCAAAACACCCAATAAATCATTCTCTTTTGGTTCCCGTTCTGATCTAAGCGTCATTTTTGAGATTGACTCTCCTGAGCCACCACAACATGAACAAGATCACTATCATCAAGACTTCCTTACTCATTTATCTACACATAAGATTTCCATTTTGAACAAGATTGCCACTACAATGATTGTTGTTGGCTATGAAACAGAGTGTTGCATTGCTTTCGCCAATTTCAGGCGAAGTGCTTTCAAGACTGCTTTACAAAGACTTGGATACAGGAGCATGAGAATGGAAGATGTGTGCAAAATGTCATGGGAAACACTAGAAAGAGAAATTACAACATGGAATCAAGTGGTTCGACATTGCACCACCATGCTTTTCAACGCTGAACGAAGACTTTATGACTCCATCTTCCCCAATCAACCCTTTATATCACAGAGCTTATTTATTGATCTTGCACGACATGTCATCATTCATTTACTCAACTTTGCACAAGGCGTCGTTCTAACGAAATGGTCGACAGAAAAACTATTCAAATTCCTAGATATGTACGAGACCTTGAGAGAAGACATTATTGGGGATTCTTGTCTAGAGCCGGGTGCAAGTGAGGTAGCATATGAGATAGTCATTGCAAAAGATAGGGTAATAAAGGCTATTGTGGCCATGTTTTGTGATTTGAAAAACTCCATAAAAAATGATAATGAAAGGATTCCTGTCCCTAATGGTGCAGTTCACCCTTTGACTCGTTATGTTATGAACTATCTTAAATATGCATGTGAGTACAAAGATACATTGGAGCAAGTGTTTGAACAAGGCCAAAGTGTAAACTTTACAAGGATTGATATTTATAATGATAAATCCATCGAAGAAGTGGAAGATGTAGGGACACCTAAGGATTCACCTTTTGCAATTCAATTGATGTCCATCATGGACCTTTTGGATGCAAATGTGGAAAGGAAGTCAAATTTGTATAGGGATCTTGCTTTGCGCTACATTTTTCTAATGAACAATGGGAGATACATAGTGCAGAAAGTCAAAGGATGTAGTGAGCTGCATGATATGATGGGTGACAATTGGTGTAGAAAGAGGCAATCGGGTTTAAGGTTGTACCATAAGTGTTATCAGAGGGAAACTTGGAGTAAGGTGTTGCAATGCCTTAAGCCAGAGGGCTTGCTGGGGACTGGGAACAAAGTGTCCAAACAACTTGTGAAGGAAAGGTTTAAGTGTTTCAATAGCATGTTTGAAGAGATACATAAGACCCAAAGTACTTGGATGGTGGTTGATGAGCAACTTCAGTCTGAACTCAGGGTTTCAATATCATCTTTGGTGATTCCAGCTTACCGGTCCTTTGTTGGAAGATTCAAACAACATCTAGAATCAAGTAGACATATTGACAAGTATATCAAATATCACCCCGAAGATATTGAGCTTTTGGTTGATGATTTTTTTGATGATTGGGATCCACTCCGAATTAATCCGAAGCCCCCTCGCTGTTTCGGACTTGGTGTCGTCCTATTCCTAGTTGCAGTCCCAGGTCGAAGTGAAAGTGGAAGGACTAACTTGTACGCGCAAAGGATTGGAAGATGA 1932 0.3996 MSSRKSDVGIMDGEKEELMQVVEDVDAFLLIIGANGGKDVPDCVRVLPKLFEDMLDSYNCGRTKFGEDATYDNSFLDVVNRMYKLSTSCSCSNTLDQTSSVLEKAMSLLEKDLCSLLEEPKTPNKSFSFGSRSDLSVIFEIDSPEPPQHEQDHYHQDFLTHLSTHKISILNKIATTMIVVGYETECCIAFANFRRSAFKTALQRLGYRSMRMEDVCKMSWETLEREITTWNQVVRHCTTMLFNAERRLYDSIFPNQPFISQSLFIDLARHVIIHLLNFAQGVVLTKWSTEKLFKFLDMYETLREDIIGDSCLEPGASEVAYEIVIAKDRVIKAIVAMFCDLKNSIKNDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEQVFEQGQSVNFTRIDIYNDKSIEEVEDVGTPKDSPFAIQLMSIMDLLDANVERKSNLYRDLALRYIFLMNNGRYIVQKVKGCSELHDMMGDNWCRKRQSGLRLYHKCYQRETWSKVLQCLKPEGLLGTGNKVSKQLVKERFKCFNSMFEEIHKTQSTWMVVDEQLQSELRVSISSLVIPAYRSFVGRFKQHLESSRHIDKYIKYHPEDIELLVDDFFDDWDPLRINPKPPRCFGLGVVLFLVAVPGRSESGRTNLYAQRIGR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02914 643 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 600 IPR004140 GO:0000145|GO:0006887
Cca02g02914 643 Pfam Exo70 exocyst complex subunit 229 594 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca02g02914 643 SUPERFAMILY Cullin repeat-like 73 599 IPR016159 -
Cca02g02914 643 Gene3D Exocyst complex component Exo70 65 603 - -
Cca02g02914 643 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 15 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02914 Cca-Chr2 50650600 50660985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02914 18 599 EXO70 exocyst subunit family AT5G13150 47.264 8.45e-177 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02914 K07195 - gmx:100784339 907.516