Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02909 aTGGGTTCTCTTCGTTTGTATTCGCCTACCTGTGCCTGCGCTTCCACTTGTTCAAGACGCTCACGCAATAAAAACCACAACCATTTCAGATTCCTCCCTCCATCTATCCCTCCACTTGGCCCTCTCCATCTCCGCTTGCCTCCGCTTCTCTCCGCTCTCTCCTCTCCCCAAACCCAATCCAGGGACCTCGAACAGGAAGAAGGAAAGGCGAATCGTACTTCGGTGTCCATGAAGCACAAAGTTCGTTTGCAAGTTCGATTGGATCACCAGGTTCAATTTGGCGATCACCTTGTCATTCGAGGATCAACCAAAGAATTAGGATCCTGGACCAAGAATGTTCCCTTGAAGTGGACCCAAAATGGATGGGTCTGCGTCTTGGACTTTAAAGGGACCGATCACATCGAGTTTAAATTCGTCACTGTCAACAAGGACGGGAGCTTAGTCTGGGAAGCTGGACAAAACAGAGTGTTGAACTTGCCCGAGGCCGGTCATTTTGCCACCGTCGCTACGTGGAACGCAACACAAGAGAATTTGGAGCTACAGCCTTTGGATGAAGCAGATGATAATACGGAGGAGGGTAATGGTTACGAGTACGATGCTTCCGAAGCCGACCCAAGTCCCTTTGTAGGACAGTGGCAAGGTAAACCTATTTCTTTCATGCAATCCAACGAGCATCGGAGCCATGAAACACAAAGGAAATGGGACACTTCAGGCCTTCAAGGCTTGTCTCTCAAGTTGGTTCAAGCTGATCAAAACGCAAGGAATTGGTGGAGAAAGCTTGATATCGTACGTGATATTATAACTGCAAGTCTGCAAGGGGAAGATCGATTGGAGGCTCTCTTATACTCTGCTATCTATCTCAAGTGGATAAACACAGGGCAAATATCTTGTTTTGAAGATGGAGGTCACCACCGACCAAATAGGCATGCTGAGATTTCAAGGCTTATATTTCGTGAACTAGAGCGACACACTAGTCGGAAGGATATATCTCCACAGGAAGTTCTAGTCATTCGCAAGATTCATCCATGCCTTCCATCTTTCAAGGCAGAATTCACTGCATCTGTTCCTCTGACCCGAATTAGAGATATTGCTCATAGAAACGACATTCCACGTGATGTCAAGTTACAAATCAAGCATACAATACAAAACAAGCTTCACCGAAATGCTGGTCCTGAAGATTTGGTTGCTACAGAAGCTATGCTTGCTAAAATCACTAAGAACCCTGGAGAATATAGTGAAGCATTCGTGAAGGAGTTCAAAATATTTCATCAAGAACTCAAAGATTTCTTCAATGCTGGCAGTCTTGCTGAACAGCTAGAATCAATTCATGAATCTATGGATGAATATGGCATTTCAGCACTTAATTCATTCTTGGAGTGCAAAAAGAATATGGATTCTGCAGCAGAATCAACTGTTGTCAGAGAAGAAGTAATTAAACCTTTATTTAAAACGATGGAATCTTTAAATGTTCTGAGAGAAACTATTGTAAAAGGTCTTGAAAGTGGCCTCAGGAATGATGCTCCAGATTCTGCAATAGCTATGCGTCAAAAGTGGCGCCTCTGTGAGATTGGGCTTGAGGATTACTCATTTGTTCTTTTAAGCAGATTTCTCAATGAGCTTGAAGCTATGGGAGGTGCTCGTTGGCTGGCTGCAAATGTGCAGTCAAAAAATGTAAACTCATGGGATGATCCACTTGGAGCCCTTATAATTGGAGTCCACCAACTCAAGTTATCTGGTTGGAAGCCAGAAGAATGTGGTGCTATTGAAAATGAGCTCATTGCATGGAGTAAAAAAGGCCTTTCTGAAAGGGAAGGAAATGAAGATGGCAAGACAATTTGGACATTGAGACTGAAAGCTACTCTTGATCGATCAAAGAGACTAACTGATGAATATACTGAAGAACTTCTTAAGATATTCCCTCAGAAAGTCCAGATACTAGGAAAAGCTCTAGGAATACCTGAAAATAGTGTCAGGACATATACAGAAGCTGAGATTCGAGCTGGTGTGATTTTTCAGGTTTCAAAACTATGTACTCTTCTTCTAAAAGCTGTTAGAAATGCACTTGGTTCTGAAGGTTGGGATGTTCTTGTTCCAGGGGCTGCTTTAGGAAAACTGGTTCAGGTTGAAAGAATTGTTCCTGGTTCACTACCATCATCAGTGGAAGGACCTATTATCCTTGTTGTTAACAAAGCTGATGGTGATGAAGAGGTAACAGCTGCTGGGAGGAACATAGTGGGAGTTATACTTCAGCAAGAGCTGCCTCACTTATCTCATCTCGGTGTTAGGGCACGACAAGAAAAGGTTGTATTTGTCACTTGTGAAGATGATGAAAAAGTTGCTGATATAGAAAGGCTTATCGGGTCATATGTGAGATTGGAAGCATCAACTGCTGGAGTTAATCTGCAGTTGTCCTCTTCAGTTGACACTGATGACAATTCTTCCATTAGAAGTTCTGATGATAGTGTCTCTGGAGTTGAGGTTCCTTCTTTTTCTTCTGGTAGAATCTTCAATTTTGACCAGGGTGCTTCCTCTGGAGGAGTTATCTTGCTTCCTGATGCAGAGACACAGACTTCAGGTGCAAAGGCTGCTGCATGTGGTCGTTTATCATCATTGTCTTTGGTTTCTGATAAAGTTTACAGTGACCAGGGAGTGCTGGCTTCATTTCGGGTTCCTTCTGGGGCAGTTTTACCATTTGGATCCATGGAATTGGAGCTAGAGAAGAGCAACTCCACTGAAGCATTCAGGTCTATCCTGGAAAAGATAGAAACAACAAAACTGGAGGGTGGTGAACTTGATGCTCTATGCCATCAACTCCAGGAATTAATTTCTTCCCTTAAGCCCTCAAAAGACATCATTGAAAGCATTGGGAGAATATTCCCAAGCAATGCGCGTTTAATTGTTCGATCCAGTGCCAATGTTGAGGACTTAGCTGGAATGTCCGCAGCTGGACTTTATGACTCAATACCCAATGTTAGTCCTTCCAATCCAACAGTTTTTGGAAATGCAGTCAGCCAAGTATGGGCCTCACTGTACACTCGGAGAGCAGTTTTGAGCCGCCGTGCTGCTGGCGTTCCTCAGAGGGAAGCTTCAATGGCAGTTCTGGTCCAAGAAATGCTTTCACCGGATTTATCATTTGTACTACATACTGTAAGCCCAACAAACCAGGATAATAATTTGGTGGAGGCTGAGATTGCTTCTGGCCTTGGTGAAACTCTGGCTTCTGGAACCCGTGGTACACCATGGCGAATATCATCTGGGAAATTTGACGGGCAAGTGCAAACACTGGCTTTTGCAAACTTCAGTGAGGAATTGCTGGTACGTGGTGCAGGGCCCGCAGATGGGGAGGTTATCCGTTTGACTGTTGATTACAGCAAGAAACCGCTCACAGTTGACTCAGTTTTCCGTCGACAGCTTGGTCAACGCCTATGTGCAGTTGGGTTTTTCCTAGAGAGAAAATTTGGTTGCCCACAGGATGTGGAAGGATGTCTTGTTGGGAAAGACATCTTTATCTACAGGAAAGAGGAAACACATACTTCTGTTCTGTATGGCAATGGCACCAGCTATGTACGTGATGGAAATGGAATGACGTTCGACAAATTGATAGATATGAAATCAACCGTTACAGTTGGCCTGTCTACTACTGTATCTTGTGCAAAGTATGTAGATTTATTTCTTGAAAGACATTTTTGTGACGTAATAATAGTTACAAAGTTGGCTCAACACCCATCAAGAATCTTAAAGAACGCTGGATTTCCGATTTCCATATACCTGTCCACAAATAGTTGCTGGAAGAGTCGGCAAAATAATGATGAACTGACCTTATTGCCCGAAGCCTATCACTCGTGTTCAATAAACGATGAATTAGTAGGGGCATCGGCCTCCATAGATACTTTGGATGAATCATCAACAGTGACTCCAACAACTTCCTTTGATCATAGCACAGAAATGCGCGTCCACAGAGTTCCTGGCAGATTATTCTTGAACGGATCATCGGAGACAGCCTCCTTGTTTTGTTTGCAGGGTCACAAAGGGGTCAACCAGGACGCTATGCTTCTTTGGGAGAACTTCTCTTCCAGAGACGACACCGTTTTGTGTGGCGTTTTCGATGGCCATGGACCCAATGGCCACATGGTTGCCAAGAAAGTCAGGGATTCCTTCCCTTTGAAGCTCATTGCTCAATGGAATTTGTATTATCCCAACAACAACGATAGCAATTACAATTACTATGATCCTCTTCGTAAATCGTTTCATGAGAAACTCACTGCCGTTGCCCCAACCAATTTCGCCACGCTCAGAGAATCCCTTGTGAACGCTTGTAAGGTGTTGGACAGAGAACTCAAACTGCACCATCAGATTGATTGCTCTTGCAGTGGAACCACGGCTGTTACCTTGCTCAAGCTGGGCCCCGACCTTGTTATTGCCAATGTGGGGGACTCCAGAGCTGTGTTGGGTACCCGAGATCTTCAAGGGTCCCTTACTGCTGTTCAGTTGACCACTGACCTTAAGCCAAATCTTCCAAGGGAAGCAGAGAGGATAAGGATTTGCAAAGGAAGGGTGTTTTCCCTTAAAAATGAACCTGGGATTGATCGAGTGTGGCTCCCCAACGTTGATTCACCTGGGCTTGCCATGGCGCGAGCTTTTGGAGATTTTTGTCTCAAGGACTTTGGAGTCATCTCTGTTCCTGATGTCTCCTATCACCGCCTCACTTACAAGGATCAATTTGTTGTATTAGCCACAGATGGGGTATGGGATGTTTTATCAAACAAACAAGTCGTGGACATTGTGGCATCTGCTCCACGCTCTTCGGCGGCTCGAGTACTGGTTGACTCAGCTGTTGAGGCATGGAAAACCAAACTTCCCACTTCCAAGGTTGATGATTGCACTGTAGTTTGCCTCTTCTTTGATTCAGAGTCAGACTTAAAATCACCATCTAACAACAGTAGGAATGCCGTTGACCACTCATCACTACTTAGAGTGGAATCTGAAAGAAAGCACCAATAG 5001 0.4435 MGSLRLYSPTCACASTCSRRSRNKNHNHFRFLPPSIPPLGPLHLRLPPLLSALSSPQTQSRDLEQEEGKANRTSVSMKHKVRLQVRLDHQVQFGDHLVIRGSTKELGSWTKNVPLKWTQNGWVCVLDFKGTDHIEFKFVTVNKDGSLVWEAGQNRVLNLPEAGHFATVATWNATQENLELQPLDEADDNTEEGNGYEYDASEADPSPFVGQWQGKPISFMQSNEHRSHETQRKWDTSGLQGLSLKLVQADQNARNWWRKLDIVRDIITASLQGEDRLEALLYSAIYLKWINTGQISCFEDGGHHRPNRHAEISRLIFRELERHTSRKDISPQEVLVIRKIHPCLPSFKAEFTASVPLTRIRDIAHRNDIPRDVKLQIKHTIQNKLHRNAGPEDLVATEAMLAKITKNPGEYSEAFVKEFKIFHQELKDFFNAGSLAEQLESIHESMDEYGISALNSFLECKKNMDSAAESTVVREEVIKPLFKTMESLNVLRETIVKGLESGLRNDAPDSAIAMRQKWRLCEIGLEDYSFVLLSRFLNELEAMGGARWLAANVQSKNVNSWDDPLGALIIGVHQLKLSGWKPEECGAIENELIAWSKKGLSEREGNEDGKTIWTLRLKATLDRSKRLTDEYTEELLKIFPQKVQILGKALGIPENSVRTYTEAEIRAGVIFQVSKLCTLLLKAVRNALGSEGWDVLVPGAALGKLVQVERIVPGSLPSSVEGPIILVVNKADGDEEVTAAGRNIVGVILQQELPHLSHLGVRARQEKVVFVTCEDDEKVADIERLIGSYVRLEASTAGVNLQLSSSVDTDDNSSIRSSDDSVSGVEVPSFSSGRIFNFDQGASSGGVILLPDAETQTSGAKAAACGRLSSLSLVSDKVYSDQGVLASFRVPSGAVLPFGSMELELEKSNSTEAFRSILEKIETTKLEGGELDALCHQLQELISSLKPSKDIIESIGRIFPSNARLIVRSSANVEDLAGMSAAGLYDSIPNVSPSNPTVFGNAVSQVWASLYTRRAVLSRRAAGVPQREASMAVLVQEMLSPDLSFVLHTVSPTNQDNNLVEAEIASGLGETLASGTRGTPWRISSGKFDGQVQTLAFANFSEELLVRGAGPADGEVIRLTVDYSKKPLTVDSVFRRQLGQRLCAVGFFLERKFGCPQDVEGCLVGKDIFIYRKEETHTSVLYGNGTSYVRDGNGMTFDKLIDMKSTVTVGLSTTVSCAKYVDLFLERHFCDVIIVTKLAQHPSRILKNAGFPISIYLSTNSCWKSRQNNDELTLLPEAYHSCSINDELVGASASIDTLDESSTVTPTTSFDHSTEMRVHRVPGRLFLNGSSETASLFCLQGHKGVNQDAMLLWENFSSRDDTVLCGVFDGHGPNGHMVAKKVRDSFPLKLIAQWNLYYPNNNDSNYNYYDPLRKSFHEKLTAVAPTNFATLRESLVNACKVLDRELKLHHQIDCSCSGTTAVTLLKLGPDLVIANVGDSRAVLGTRDLQGSLTAVQLTTDLKPNLPREAERIRICKGRVFSLKNEPGIDRVWLPNVDSPGLAMARAFGDFCLKDFGVISVPDVSYHRLTYKDQFVVLATDGVWDVLSNKQVVDIVASAPRSSAARVLVDSAVEAWKTKLPTSKVDDCTVVCLFFDSESDLKSPSNNSRNAVDHSSLLRVESERKHQ 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02909 1666 SUPERFAMILY Starch-binding domain-like 78 172 IPR013784 GO:0030246
Cca02g02909 1666 MobiDBLite consensus disorder prediction 55 75 - -
Cca02g02909 1666 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 857 1170 - -
Cca02g02909 1666 ProSiteProfiles PPM-type phosphatase domain profile. 1333 1634 IPR001932 -
Cca02g02909 1666 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 888 1164 IPR002192 GO:0005524|GO:0016301|GO:0016310
Cca02g02909 1666 CDD PP2Cc 1334 1634 IPR001932 -
Cca02g02909 1666 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 73 173 IPR002044 GO:2001070
Cca02g02909 1666 SMART CBM_20_2 78 169 IPR002044 GO:2001070
Cca02g02909 1666 MobiDBLite consensus disorder prediction 1638 1666 - -
Cca02g02909 1666 Pfam Protein phosphatase 2C 1346 1612 IPR001932 -
Cca02g02909 1666 Pfam Starch binding domain 81 164 IPR002044 GO:2001070
Cca02g02909 1666 Gene3D - 847 1038 IPR013815 GO:0005524
Cca02g02909 1666 MobiDBLite consensus disorder prediction 1638 1654 - -
Cca02g02909 1666 SUPERFAMILY PP2C-like 1332 1635 IPR036457 -
Cca02g02909 1666 SMART PP2C_4 1324 1632 IPR001932 -
Cca02g02909 1666 Gene3D Immunoglobulins 76 172 IPR013783 -
Cca02g02909 1666 Gene3D - 1040 1174 - -
Cca02g02909 1666 Gene3D - 1328 1636 IPR036457 -
Cca02g02909 1666 PANTHER PHOSPHOGLUCAN, WATER DIKINASE, CHLOROPLASTIC 58 1172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02909 Cca-Chr2 50557678 50582447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02909 1318 1638 PP2C-type Phosphatase Gene Family AT1G16220 58.735 8.72e-128 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02909 K15535 - gmx:100783273 1981.07