Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02871 ATGGTATCAGCTACAATTAGGCGAATTGTTTCACCCTGTTGGAGACCATCATCTTACACAGATGAGGTTTCTAGTGGGAATGGAGATGGAAGTGGGCGTGGTCGTGTTAATGGTTTGTTGTGGTCTAAAGATTTGGGAAGACATGCCAATGGTGAGTTCTCAATGGCAGTTATTCAAGCAAACAACTTGTTGGAGGATCAAAGCCAACTTGAATCTGGCCCCTTGAGCTCATCTGATGGAAGTTCTATAGGGACTTTTGTTGGTATATACGATGGCCATGGAGGTCCAGAAACTGCCCGGTTTGTCAATGAACGTCTGTTTAGACATATCAAGAAATTTGCTGCGGCAAATCATGGAATGTCAGCTCATGTTATCAATGAAGCATTCTTTGCAACAGAAGAACAATTTCTTTCTCTGGTAGAGAGGCAGTGGCTGCACAAACCGCAGATAGCGTCAGTTGGAGCTTGCTGTCTGGTAGGCATAATATGTAATGGGGAGCTCTTTATTGCAAATGCAGGAGATTCTCGAGCAGTATTAGGTAGAGTGACTGAGGCTACGAAAGAGATTAAAGCTGTTCAACTATCCACAGAGCACAATGCTAGCCTCGAATGTGTTAGAGAGGAGTTGCGCTCATTGCATCCTGATGATCCGCAGATTGTGGTTTTGAAGCACCAGGTCTGGCGCGTGAAAGGTCTGATTCAGGTTTCAAGATCTCTTGGTGATGCCTATCTAAAGAGGGCCGAGTTTAATAAAGCACCTTTGTTGGCAAAATTTCGACTATCAGAACCCTTTGAGCAGCCAATCCTTAAAGCTGAACCAACAATACTAGTACAGAAACTCCTCCCTCAAGACCAGTTTCTTATATTTGCATCAGATGGATTATGGGAACACATCAGCAATCAAGAAGCAGTTGACATTGTCCAGAACTGTCCGCATAATGGAGTAGCCAAGAAACTTATCAAAACTGCACTTTGTGAAGCTGCCAAGAAAAGAGAAATGAGATACTCAGATTTGAAAAAGATTGACCGAGGTGTGAGGAGACATTTCCATGATGACATCACGGTTATAGTTTTGTTTCTTGATTCAACTTTTTTGACATGTGCCAATTCACGTGTGCCCTTGGTTTCGGTCAAAGGAGGTGGTGATGTTGGTTATGAAATTGGTATTATAGATGCATAG 1179 0.4292 MVSATIRRIVSPCWRPSSYTDEVSSGNGDGSGRGRVNGLLWSKDLGRHANGEFSMAVIQANNLLEDQSQLESGPLSSSDGSSIGTFVGIYDGHGGPETARFVNERLFRHIKKFAAANHGMSAHVINEAFFATEEQFLSLVERQWLHKPQIASVGACCLVGIICNGELFIANAGDSRAVLGRVTEATKEIKAVQLSTEHNASLECVREELRSLHPDDPQIVVLKHQVWRVKGLIQVSRSLGDAYLKRAEFNKAPLLAKFRLSEPFEQPILKAEPTILVQKLLPQDQFLIFASDGLWEHISNQEAVDIVQNCPHNGVAKKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLFLDSTFLTCANSRVPLVSVKGGGDVGYEIGIIDA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02871 392 SUPERFAMILY PP2C-like 64 361 IPR036457 -
Cca02g02871 392 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 382 - -
Cca02g02871 392 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Cca02g02871 392 ProSiteProfiles PPM-type phosphatase domain profile. 52 360 IPR001932 -
Cca02g02871 392 CDD PP2Cc 53 360 IPR001932 -
Cca02g02871 392 Gene3D - 42 367 IPR036457 -
Cca02g02871 392 PANTHER ALPHABET, ISOFORM E-RELATED 8 382 - -
Cca02g02871 392 SMART PP2C_4 42 358 IPR001932 -
Cca02g02871 392 Pfam Protein phosphatase 2C 72 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02871 Cca-Chr2 50076145 50080327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02871 3 384 PP2C-type Phosphatase Gene Family AT3G12620 71.990 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02871 K01102 - gmx:100807559 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02871 02 50076145 50080327 Cca02g02871 02 50076145 50080327 ECH