Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02868 ATGCCGGAGCTTCGTAGCGGAGTGCGACGCGGCCGCGGCCGTGGCCAGAAAGAATCGGAGCCGGCAAAGAAGAGCGTGAAGGCTCGTGCTGCTGCGGCTCCAAGGGGGAGACCGAGGACTAGATTGGCGGCGAAGGAATTGGAGCGTGTGGAGCCGTTGATACCGATCCCGATATCTGAGCCGTTGAAACCGATTCGGATACCGGAGCCGGTGAAGGAAGAGAATAAGAAAGGAGGTGCGGGCGTGATGGCAAGTGGTGGGGTGAGTGCTAACAAGGGTGACGATGATGCCAACGCTCCACCTTTTCCAGATAGGGTTCAAGTGGGTGGATCACCAATGTACAAGGTAGAGAGGAAGCTGGGTAAAGGTGGATTTGGTCAGGTTTTTGTTGGCCGTAGGGAGCGTGTGACAGGTGCTGGAGCTATGGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAGGGCTGTACCTATGGCCCTCCTTACGAGTGGCAAGTATACAACACTCTTGGGGGTAGTTACGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAATATTATGTGATGGTTATGGACATACTTGGTCCCAGTTTGTGGGATCTCTGGAATTCCTCAAGCCAGACGATGTCTGCTGAAATGGTCTCATGTATAGCGGTTGAGTCCTTATCAATACTCGAGAAGATGCACTCAAAAGGTTATGTACACGGTGATGTAAAACCAGAGAACTTTTTACTTGGTCAACCAGCTACGGCGCAAGAGAAGAAACTGTTTCTTGTTGATCTTGGATTAGCAACAAAATGGAGAGACACCTCCAGTGGACTGCATGTTGAATATGATCAACGTCCTGATATGTTTAGAGGGACTGTTCGTTATGCTAGTGTTCATGCACATTTGGGGAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCATACACACTCATCTTCCTTCATAAGGGTCGATTACCGTGGCAAGGTTATCAGGGTGATAGCAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGACGCTGTGCTGCTTGTGCCCTTCTCCTTTTAGGCAATTTCTTGAGATTGTAGTGAATATGAAATTTGATGAAGAACCTAATTATTCCAAGCTAATATCTTTGTTTGATGGTACGATTGGACCCAATCCTGCTTTGCGGCCAATTAATACTGATGGTGCCCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATATTGAGGAAGATGATTCACAGCCAAAGAAGAAGGTTCGTCTAGGGGTTCCTGCTACACAGTGGATTTCAATATACAATGCAAGACTACCAATGAAACAAAGGTATCATTACAATGTGTGTGATTCAAGATTAGAACAGCATGTCGAGAGAGGGATTGCAGATGGCCTTCTTATTAGTTGTGTGTCTTCTTGTGGCAATTTTTGGGCCCTTATTATGGATGCTGGAACTGGTTTTACAGCTCAAGTTTTCAAGTTGTCACCTTTTTTCTTGCACAAGGAATGGATCATGGAGCAGTGGGATAAAAATTATTACATTACTTCTATTGCAGGGTCCAATACTGGCAGCTCTCTGGTGGTGATGTCAAAAGGTACCCAGTATACTCAACAATCCTACAAAGTAAGCGAATCTTTCCCCTTCAAATGGATAAACAAAAAGTGGAGAGAAGGTTTTCATGTCACCTCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGCAATGCTGGATTCAGTAAACAGGTGGTAGAACTTGATTTTCTCTATCCAAGTGAGGGCATCCATAAACGTTGGGATAAAGGTTTTAGGATTACAGCAACTGCAGCTACATCGGATCAATCTGCTCTAATATTAAGTATTCCAAGGCGCAAGCTCAGTGATGAAACTCAGGAAACTCTACGAACATCTCAATTTCCCAGCCAACATGTTAAGGACAAATGGTCAAAAAACCTTTACCTTGCCTGTTTGTGCTACGGGCGCACAGTATGCTGA 2013 0.4536 MPELRSGVRRGRGRGQKESEPAKKSVKARAAAAPRGRPRTRLAAKELERVEPLIPIPISEPLKPIRIPEPVKEENKKGGAGVMASGGVSANKGDDDANAPPFPDRVQVGGSPMYKVERKLGKGGFGQVFVGRRERVTGAGAMEVALKFEHRNSKGCTYGPPYEWQVYNTLGGSYGIPKVHYKGRQGEYYVMVMDILGPSLWDLWNSSSQTMSAEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPATAQEKKLFLVDLGLATKWRDTSSGLHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDSKSFLVCKKKMGTSPETLCCLCPSPFRQFLEIVVNMKFDEEPNYSKLISLFDGTIGPNPALRPINTDGAQKVGQKRGRLNIEEDDSQPKKKVRLGVPATQWISIYNARLPMKQRYHYNVCDSRLEQHVERGIADGLLISCVSSCGNFWALIMDAGTGFTAQVFKLSPFFLHKEWIMEQWDKNYYITSIAGSNTGSSLVVMSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSKQVVELDFLYPSEGIHKRWDKGFRITATAATSDQSALILSIPRRKLSDETQETLRTSQFPSQHVKDKWSKNLYLACLCYGRTVC 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02868 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Cca02g02868 670 MobiDBLite consensus disorder prediction 1 43 - -
Cca02g02868 670 SMART serkin_6 114 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02868 670 Pfam Protein kinase domain 114 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02868 670 MobiDBLite consensus disorder prediction 1 25 - -
Cca02g02868 670 SUPERFAMILY Protein kinase-like (PK-like) 114 393 IPR011009 -
Cca02g02868 670 CDD STKc_CK1 113 384 - -
Cca02g02868 670 MobiDBLite consensus disorder prediction 69 109 - -
Cca02g02868 670 ProSitePatterns Protein kinases ATP-binding region signature. 120 147 IPR017441 GO:0005524
Cca02g02868 670 PANTHER CASEIN KINASE I-LIKE PROTEIN 66 643 - -
Cca02g02868 670 Gene3D Transferase(Phosphotransferase) domain 1 91 426 - -
Cca02g02868 670 ProSiteProfiles Protein kinase domain profile. 114 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02868 670 PANTHER CASEIN KINASE-RELATED 66 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02868 Cca-Chr2 50056648 50062267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02868 93 342 AGC Kinase Gene Family AT3G08720 22.925 1.13e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Cca02g02868 Pkinase 6.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02868 - - gmx:100807373 1217.22