Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02846 ATGGCTTCAAGTTCTCACTCTATGTCCTTTCCCACCTTTAAACTAATAAAGCTTTGCTTGATTTTTATTATCACAAGTCTTATTAGGACAAGTTCAGGTCAGTTATCCACTAAATTCTATGATGAAAAGTGTCCCAAAGCCCTTACCACCATTCGAAAAGCAGTGGAAGATGCTGTGCACAAGGAGAGTCGCATGGGTGCCTCCTTGCTCCGACTCCACTTCCATGACTGCTTCGTTCAAGGATGTGATGCATCAGTATTGTTAGACGACACGACAAATTTCACTGGCGAGAAAAACTCATTTCCTAATGCTAACTCCCTTAGGGGTTTTGAGGTCATAGACAACATCAAATCTAAGCTGGAGAGAATGTGCCAAGGTGTTGTCTCTTGTGCTGACATCTTAGCCGTTGCTGCTAGAGATGCTGTAGTTGCTCTTGGTGGACAAAAATGGGATGTGCAATTAGGTAGAAGAGATTCAACCACAGCAAGTTTAGCTGACGCTAATTCAGACTTACCAGCTCCCTTTTTGGATCTTAGTGGCCTCACCACTGCTTTTGCGAAGAAAAATTTCACTACCCAAGAATTGGTTACTTTATCAGGTGCTCATTCAATAGGCCTAGTGAGGTGCATTTACTTCAAAACGAGGATTTACAACGACAGTGACATAGATTCAGCATATGCAGAACAAATGCAAGAACAATGTCCATTTGAAGGTGGTGATGACAATTTGTCTCCCTTAGATTCCAAGAGTCCATTCAAATTTGACAATGCTTTCTACAACAACTTGGTGCAAGAAAAGGGTCTGCTACACTCAGACCAACAATTGTTCACGAACAACGGATCTGGAGACACAAATTCTCAAGTTATTAGATATAGCAGAAGCATGGGGAGTTTTAAGAAGGACTTTGCAGATGCAATGTTTAAGATGAGCATGTTGACCCCACTTACTGGCTCCGACGGTGAGATTAGGGAAAATTATAGGGTTGTCAATCCACCAACCCCTATTTAG 1008 0.4196 MASSSHSMSFPTFKLIKLCLIFIITSLIRTSSGQLSTKFYDEKCPKALTTIRKAVEDAVHKESRMGASLLRLHFHDCFVQGCDASVLLDDTTNFTGEKNSFPNANSLRGFEVIDNIKSKLERMCQGVVSCADILAVAARDAVVALGGQKWDVQLGRRDSTTASLADANSDLPAPFLDLSGLTTAFAKKNFTTQELVTLSGAHSIGLVRCIYFKTRIYNDSDIDSAYAEQMQEQCPFEGGDDNLSPLDSKSPFKFDNAFYNNLVQEKGLLHSDQQLFTNNGSGDTNSQVIRYSRSMGSFKKDFADAMFKMSMLTPLTGSDGEIRENYRVVNPPTPI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02846 335 PANTHER PEROXIDASE 10 333 - -
Cca02g02846 335 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Cca02g02846 335 Gene3D Peroxidase, domain 2 172 309 - -
Cca02g02846 335 SUPERFAMILY Heme-dependent peroxidases 34 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 Pfam Peroxidase 52 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Cca02g02846 335 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 PANTHER PEROXIDASE 72-RELATED 10 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 ProSiteProfiles Plant heme peroxidase family profile. 34 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g02846 335 CDD secretory_peroxidase 34 329 IPR033905 GO:0004601|GO:0042744
Cca02g02846 335 Gene3D - 38 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02846 Cca-Chr2 49851260 49853027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02846 34 324 Peroxidase AT5G05340 56.655 2.44e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02846 K00430 - gmx:100802244 514.227