Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02837 ATGATCTCAAACTCGGACACTGTGGAACCAGCCACGGCGgccaacgccaacgccaccgccaccgccaccgccGGCGTCGTAACAGCCGCCTCTTCTTCCAATGAACATAAGCCTGCAACGCCGGCGGCACCGAACATTGTCATGACCTCCAGGGATCACGATTCTCTCTTCAGCGGTGGCGGCATGAGCTTCCTCTCTGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAGAGGTCATCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGCCAGACGGTTGCCTTTTTTGGTGTTTTTGATGGCCATGGAGGTTCTCGAACTGCAGAATATCTGAAAAATAATCTATTTAAGAATTTGAGTAGCCACCCTGACTTTATCAAAGACACAAAGACTGCTATAGTTGAAGCATTTAAACAGACAGATGTTGACTACCTTAATGAAGAAAAGGGGCATCAAAGAGATGCTGGGTCAACTGCATCAACAGCTATGTTGTTGGGAGATCGAATTGTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCATGTAGAGCTGGTTCAGCTGTTCCTTTGTCGATCGATCACAAGCCTGATAGATCCGATGAACGGCGAAGGATTGAACAGGCTGGGGGATTCATAATTTGGGCTGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAACCGTACGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGACGGTGTTGATTTTATTATAATTGCTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAAGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCATCCAGAGAACTTATAAAAGAAGCTTATGCACGAGGAAGCTCAGACAACATCACTTGTGTAGTTGTTCGATTTGATCTATCTTGA 969 0.4293 MISNSDTVEPATAANANATATATAGVVTAASSSNEHKPATPAAPNIVMTSRDHDSLFSGGGMSFLSGSRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQTVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRIVVANVGDSRVVACRAGSAVPLSIDHKPDRSDERRRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02837 322 Pfam Protein phosphatase 2C 75 312 IPR001932 -
Cca02g02837 322 ProSiteProfiles PPM-type phosphatase domain profile. 74 319 IPR001932 -
Cca02g02837 322 CDD PP2Cc 73 319 IPR001932 -
Cca02g02837 322 Gene3D - 67 321 IPR036457 -
Cca02g02837 322 SMART PP2C_4 63 317 IPR001932 -
Cca02g02837 322 ProSitePatterns PPM-type phosphatase domain signature. 105 113 IPR000222 GO:0043169
Cca02g02837 322 PANTHER ALPHABET, ISOFORM E-RELATED 38 322 - -
Cca02g02837 322 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 38 322 - -
Cca02g02837 322 SUPERFAMILY PP2C-like 67 320 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02837 Cca-Chr2 49769319 49776108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02837 46 322 PP2C-type Phosphatase Gene Family AT1G43900 73.646 4.79e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02837 K17506 - gmx:100776867 561.992