Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02814 ATGGAATTGCAGAAACAGTTGCAGAGGTGGCAGCAGAGTAGTACTGATGCCAATGGTGAACTCATGTATGTCAAGGTCATGACCGATGAGCAGTTGGAAACTCTGAGGAAGCAAATTGCTGTTTATGCCACCATTTGTGACCAACTTATTGAAATGCACAGAACACTCTCTGCTCAACAAGATCTTGCAGGGGTTAGATTGGGAAACATATACTGTGATCCATTGATGGCATCTGGTGGTCACAAAATAACATCGAGACAAAGGTGGACACCTACACCTGTGCAGCTTCAGATTCTTGAAAGAATATTTGACCAGGGGAATGGAACTCCAAGCAAGGAAAAAATAAAGGAGATAACTGCTGAACTGGGCCAGCATGGCCAAATTTCTGAAACAAATGTGTACAATTGGTTTCAGAATAGGCGTGCTCGATCCAAAAGAAAACTGCAAAATGTGGCTCCTACCAACACTGAATCAGAAGTGGACACTGAGGTTGACTCTAAGGATAAGAAGACAAAACCTGAGGATTTTCAGTCCCAACTTAACATAACAACTTCTTCTGGAGGGACTCAAAAGTTGTGCTTCCAGAACCACAACCCTCAAGTGTACTCTGACATGCACTACTTGAACACAGATTCTAACAACAAGCCATATTCCATGTTCCCATCAGATGCTACTCTCAAATCCACAACAAATTTGACTCCTATGTCTGTCTTTAATGAGGTGCTGTCAAACTCAAGGAGTGAGTATGTAGGAGGAAAAATGGAAGTTGCTGGGACTGTAAGCTACAATTTATTCCACCAAGCAGGAGACTGCAATCTCACGGGTTGA 828 0.4275 MELQKQLQRWQQSSTDANGELMYVKVMTDEQLETLRKQIAVYATICDQLIEMHRTLSAQQDLAGVRLGNIYCDPLMASGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQHGQISETNVYNWFQNRRARSKRKLQNVAPTNTESEVDTEVDSKDKKTKPEDFQSQLNITTSSGGTQKLCFQNHNPQVYSDMHYLNTDSNNKPYSMFPSDATLKSTTNLTPMSVFNEVLSNSRSEYVGGKMEVAGTVSYNLFHQAGDCNLTG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02814 275 CDD homeodomain 86 147 IPR001356 GO:0003677
Cca02g02814 275 SUPERFAMILY Homeodomain-like 84 148 IPR009057 -
Cca02g02814 275 Pfam Homeodomain 86 146 IPR001356 GO:0003677
Cca02g02814 275 MobiDBLite consensus disorder prediction 145 175 - -
Cca02g02814 275 MobiDBLite consensus disorder prediction 160 175 - -
Cca02g02814 275 ProSiteProfiles 'Homeobox' domain profile. 82 147 IPR001356 GO:0003677
Cca02g02814 275 Gene3D - 88 152 - -
Cca02g02814 275 PANTHER - 1 274 - -
Cca02g02814 275 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 274 IPR044559 GO:0003700
Cca02g02814 275 SMART HOX_1 84 151 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02814 Cca-Chr2 49549733 49552248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02814 22 275 Wox Gene Family AT4G35550 50.923 2.75e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Cca02g02814 Homeodomain 7.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02814 - - gmx:100817342 462.611