Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02806 ATGGAAGAGATGTCGGGTTCAGCAACAGCAATAAACTCTACCAATATAGGATTTCAGCTATTGAAGAAGCAAGGGTGGAAAGAAGGGACTGGTCTTGGAGTCTCTGAGCAGGGTAGATTAGAACCTGTGGAAACTTATGTGAAGAATAATAAACGCGGTTTGGGAGCAGATAAAGTGAAGAAAAAGGCCGTGAAAGTAAAACCTGAATCGGATCATAGCGATTCCTCTAAAGGGGACAATCAACAGGACCATTTACCTCGAAAGAAAACCAAAACACTTTCTAAACGGATGAGAAAGATGCAGGAGTTTGAAAAGAAGATGCAGGAGAAGGAATTTGAGCGCACTTTCTTCAGAGAGTTCTGGCCAGAAAATGTGTAA 378 0.418 MEEMSGSATAINSTNIGFQLLKKQGWKEGTGLGVSEQGRLEPVETYVKNNKRGLGADKVKKKAVKVKPESDHSDSSKGDNQQDHLPRKKTKTLSKRMRKMQEFEKKMQEKEFERTFFREFWPENV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02806 125 MobiDBLite consensus disorder prediction 51 88 - -
Cca02g02806 125 Pfam G-patch domain 14 56 IPR000467 GO:0003676
Cca02g02806 125 MobiDBLite consensus disorder prediction 51 106 - -
Cca02g02806 125 PANTHER BAT4 PROTEIN-RELATED 4 125 IPR039146 -
Cca02g02806 125 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
Cca02g02806 125 SMART G-patch_5 11 57 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02806 Cca-Chr2 49480085 49483090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02806 11 55 C2H2 Transcription Factor Family AT5G26610 51.111 8.65e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02806 - - gmx:100812494 182.956