Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02796 ATGGCAGAGGTGAAACTTGTGGGGTTTTGGTCTAGCCCTTTTGTTCACAGAGTGATATGGGCTCTAAAGTTCAAGGGCATTAGGTATGAGTACATAGAAGAAGACAGGTACAACAAAAGTGAACTACTTCTACAATCCAATCCACTTCACAAGAAAGTCCCTGTGCTTATTCATGGAGGCAAAGCCATTGCAGAGTCTCTAGTGATCCTTGAATACATCGAAGAAACATGGCCACAGAATCCATTGCTGCCAAAAGACAACCACCAGAGGGCCTTAGCTCGCTTTTGGATTAAATTTGGAGAGGATTCCATCGCCTCCATTACTGATCTGTTTCTCCGGCCCCCTAAAGATGAAGAAGAAAGAGCAAGTGCAAGGAAAAAGGCACAAGAGACTATCATGGTAATGGAAGAACAAGGTCTAGGGGAGAAAAAGTTCTTTGGAGGCAACAACATTAGTATGGTGGACATAGCATATGGATGCCTGAGTCATTGGTTAGAAGGGTTGGAGGAAATTGTGGGGATGAAACTGATTGAAGAAAACAAATTTCCTCGGTTGCATGCGTGGACTCAAAATTTCAAACAAGTTCCTATCATTAAAGAAAACCTTCCTGATTACGGGAAATTGTTGATCCATCTCCAAAAGCGTAGACAGGAATATGTCACATAG 666 0.4249 MAEVKLVGFWSSPFVHRVIWALKFKGIRYEYIEEDRYNKSELLLQSNPLHKKVPVLIHGGKAIAESLVILEYIEETWPQNPLLPKDNHQRALARFWIKFGEDSIASITDLFLRPPKDEEERASARKKAQETIMVMEEQGLGEKKFFGGNNISMVDIAYGCLSHWLEGLEEIVGMKLIEENKFPRLHAWTQNFKQVPIIKENLPDYGKLLIHLQKRRQEYVT 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02796 221 CDD GST_N_Tau 4 77 - -
Cca02g02796 221 PANTHER GLUTATHIONE TRANSFERASE GST 23-LIKE 1 217 - -
Cca02g02796 221 CDD GST_C_Tau 88 215 IPR045074 GO:0004364|GO:0006749
Cca02g02796 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Cca02g02796 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 221 IPR010987 -
Cca02g02796 221 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Cca02g02796 221 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Cca02g02796 221 SFLD Main (cytGST) 1 219 - -
Cca02g02796 221 Gene3D - 83 221 - -
Cca02g02796 221 Pfam Glutathione S-transferase, C-terminal domain 110 193 IPR004046 -
Cca02g02796 221 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Cca02g02796 221 Gene3D Glutaredoxin 1 82 - -
Cca02g02796 221 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Cca02g02796 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02796 Cca-Chr2 49392727 49393533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02796 3 218 Glutathione S-transferase Gene Family AT2G29420 43.519 1.23e-59 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02796 K00799 - gmx:547586 401.364