Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02779 ATGCCCTGCCCAATACTAGCCAAAGCACAACTGTTGCCGCTGGATGTAGGGGCCAAATTACCAACATCTGATCTCTTGCAAGAAAAGGTTGAGGAGCTCAAAGGTGTGTTGGAAAAGGAAATTTTAAAGGTTAAGGATCAATGCATGTCAAATCAGGGCATGCATTATGCTGCCAATGAACAATACCAGGCAAGGGTGGAACCCTCCCCTCATTTCATTCAAATACCATCTGATGGAGCTGATGTCTGGGAAATTGATACCAATCAGCTGAAATATGAAAACAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGCACATATTGCAGTCAAGATGTGGGTATCAAAGTTCTTAAGCCTGAGCGCACAAGTACAGATATGCTGAGAGAATTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATTGGCGCATGTACTAGGCCCCCAAGTCTTTGCATTGTTACTGGTAAATAG 501 0.4311 MPCPILAKAQLLPLDVGAKLPTSDLLQEKVEELKGVLEKEILKVKDQCMSNQGMHYAANEQYQARVEPSPHFIQIPSDGADVWEIDTNQLKYENKVGSGSFGDLYRGTYCSQDVGIKVLKPERTSTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPSLCIVTGK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02779 166 Pfam Protein tyrosine and serine/threonine kinase 90 164 IPR001245 GO:0004672|GO:0006468
Cca02g02779 166 ProSiteProfiles Protein kinase domain profile. 90 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02779 166 SUPERFAMILY Protein kinase-like (PK-like) 66 164 IPR011009 -
Cca02g02779 166 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 27 164 - -
Cca02g02779 166 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 164 - -
Cca02g02779 166 Gene3D Phosphorylase Kinase; domain 1 80 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02779 Cca-Chr2 49261886 49264576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02779 27 164 MAP Kinase Kinase Kinase AT2G17700 60.870 3.45e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Cca02g02779 PK_Tyr_Ser-Thr 5.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02779 - - gmx:100816767 248.054