Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02778 ATGAAAGCAATGACAGCAACAACGTTTGATGTCTCTGCCGCTTGCTTCCGTGCTCCTCCTTCACGTTCTCTCCTCTTCTCATCCAATCTATGTCATACAAGCTCTTCAATTCTGAACTCCCTGAATTCTCACAAGGGAAGGTTTAGTGTTTCTGTCCCACCCAAGTTTCCAAACTTCCGGAGGGAAGTTGGTATGAAGGGAAATTTAGAGGCTGTTAGAGTTCCCACTTCAGTGCCTGTGCGTGTAGCATACGAGCTTCTTCTAGCTGGTCACAAGTATTTGGATGTAAGGACCCCTGAAGAGTACCATGCTGGACACGCTCCTGGCGCAGTTAACATACCTTACATGTTCAGAGTTGGATCAGGGATGACTAAAAACAGCAACTTTCTTAGAGAGGTGGCTTCACATTTTAGGAAAGATGATGAAATTATTGTTGGGTGTCAGCTTGGTAAAAGGTCCATGATGGCCGCAAGTGACTTGCTAGCTTCAGGGTTCACTGGACTCACAGACATGGCCGGCGGTTATGCTGCTTGGACACAAAATGGACTTCCAACAGAACAATGA 564 0.4628 MKAMTATTFDVSAACFRAPPSRSLLFSSNLCHTSSSILNSLNSHKGRFSVSVPPKFPNFRREVGMKGNLEAVRVPTSVPVRVAYELLLAGHKYLDVRTPEEYHAGHAPGAVNIPYMFRVGSGMTKNSNFLREVASHFRKDDEIIVGCQLGKRSMMAASDLLASGFTGLTDMAGGYAAWTQNGLPTEQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02778 187 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 187 - -
Cca02g02778 187 CDD RHOD 94 178 - -
Cca02g02778 187 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 73 186 IPR036873 -
Cca02g02778 187 Gene3D - 64 186 IPR036873 -
Cca02g02778 187 Pfam Rhodanese-like domain 93 180 IPR001763 -
Cca02g02778 187 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 187 - -
Cca02g02778 187 ProSiteProfiles Rhodanese domain profile. 87 187 IPR001763 -
Cca02g02778 187 SMART rhod_4 77 184 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02778 Cca-Chr2 49256931 49258871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02778 77 184 Sulfurtransferasese or Rhodanese AT5G66170 45.455 3.45e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02778 - - aprc:113868825 322.783