Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02773 ATGTGCTCTCCTCCTGTCTCCACCAGCTCCTGCCGCTCAATCATTAGACCCCTGTTCCCTCAGCCTCAGCCTCACTATTCTTTCTCCCTGCAACTGCAACAAACAATCAACACTTTCTCACACACCATGTCCACCTCCGACGCCACCACTAACCAGCCCCTCGCCGTCAAGAAGCCCCCCTCcaaggaccgccacagcaaggtcgacggccgcggacgccgcatacgcatgcccatcatatgcgccgcccgcgtcttccagctcacgcgggagctcggccacaagtccgacggtcaaaccatcgagtggctcctccgccaggccgagccctccatcatcgccgccaccggcaccggcaccacccccgccaccttctcctccgtctccctctcagttcgctcctcctccaCTGACCACAAGCCCCAGTTGCTCGCTCCCACGCCTTTTATCCTCGGCAAGCGCATACGCACCGACGAAGACTCTTCCAAAGACGAGGCCGTTTCCGTGGGCCCCTCTCTCGTGGGCCCTTCCACCCCTCCCGGACTGTGGGCCCTCCCGGCCCGCCCCGATTTCGGACAAATTTGGAGCTTCGCCGCCGCTGCTCCCGAAATGGTGGTGCAGCCCGCCGCTGTGTCGGTGTCAcagcagcaacaacagcagcagcagcaacagGCTTCGCTCTTCGCTCATCATCACCGACAACAGCAACAGGCCATAGGAGAAGCTTCGGCGGCGAGGGTTGGGAATTACCTTCCCGGCCATCTCAATTTGCTCGCTTCATTGTCCGGTGGGCCTGGGAATTCTGGTGTGGATTTGGCGCAGCTGAATGCTGATGAGGTGACTGGTGGCATGGTTACTGTTTTTGATGTTTCACCTTTGGTTAAAACAAATTTGGTGTTGGTGCATTTGATTCAACAGTCAATCTGGGGTTGTTACCGAGAGTATAAAATCTCAAATTTGGCCGATGTGTTGTATCACATTAATGGCATATTTAAACTGGTTGTTATGACCTTGACTTTTATTGCCACGCCCTTGCAAACTACTACCATGTGCCTCTGCACCCTCGGTTATCCATTTGCCTCACAAAACAAATTTAACACAATGCTGGAAGCTGGCTTCAAGTGGCAAAAGGATCACCTGAAGCATTGA 1149 0.4117 MCSPPVSTSSCRSIIRPLFPQPQPHYSFSLQLQQTINTFSHTMSTSDATTNQPLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSSVSLSVRSSSTDHKPQLLAPTPFILGKRIRTDEDSSKDEAVSVGPSLVGPSTPPGLWALPARPDFGQIWSFAAAAPEMVVQPAAVSVSQQQQQQQQQQASLFAHHHRQQQQAIGEASAARVGNYLPGHLNLLASLSGGPGNSGVDLAQLNADEVTGGMVTVFDVSPLVKTNLVLVHLIQQSIWGCYREYKISNLADVLYHINGIFKLVVMTLTFIATPLQTTTMCLCTLGYPFASQNKFNTMLEAGFKWQKDHLKH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02773 382 ProSiteProfiles TCP domain profile. 61 115 IPR017887 -
Cca02g02773 382 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 43 270 - -
Cca02g02773 382 MobiDBLite consensus disorder prediction 43 69 - -
Cca02g02773 382 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 270 IPR005333 GO:0003700
Cca02g02773 382 Pfam TCP family transcription factor 61 224 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02773 Cca-Chr2 49176849 49179293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02773 54 267 TCP Transcription Factor Family AT5G23280 68.468 4.51e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Cca02g02773 TCP 2.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02773 K16221 - gmx:100799005 363.999