Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02767 ATGGGTGGAGTGGAAAAGGTGTTTAAGCAATTTTTTAGTGGTGGAGTGGAAAGTTTCCCAGTGCTATCTGTCTACCACATTCGGTCCTCTAGAAGgagaaaaagtaaggaagGTTGTTATTCTACTGAAGAAGATAGTTTACAAAGTAAAAATGTTCAGAAGCCAACACAGAAGTACATAAAGATAGTCACAGTGGATAATTTTGTTTTCTGGTTCATGGGTGTCTTACAATATCAGAAAACTATCAAATATCTTGAGCTTAGTTGGGTACCCATCCACCATGGACAGACCAATGTTAGAAAGGACATTACTGTATACGAAGGAAAAATGAAATATGAAAACAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGCACATATTGCAGTCAAGATGTGGGTATCAAAGTTCTTAAGCCTGAGCGCACAAGTACAGATATGCTGAGAGAATTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATTGGCGCATGTACTAGGCCCCCAAGTCTTTGCATTGTTACTGTGTCTGCATCTACCTCGTCCTCTCACTTTTTGTCGCTCAGCCAGAGACTCTCCTCTCTCAGAACAAGGCACGGTTTTGGGAAGCATTTGTGTGCGGTTCCTCAACGCACGGTGACATGCGGTGCGAGCGTGAGGGAGATCAAGGAGACTGAATTCAAAGAGACGGTGTTGAAGGCTAACTGTCCGGTTCTGGTTGAGTTCGTGGCTACTTGGTGCGGTCCTTGCCGTCTCATCGCTCCCGCTATGGAATCCCTCTCTAAGGAATATGAAGACAGATTAACTGTTGTGAAGATTGATCATGATGCCAACCCAGGACTAATTGAAGAGTATAAAGTTTATGGACTACCCACGTTAATACTCTTCAAGAACGGGCAAGAAGTTCCAGAAAGCAGAAGGGAAGGTGCAATTACAAAAGTGAAACTTAAAGAGTACCTGGATGCTTTATTGGAATCAATATCAGTTTCATAG 1020 0.4196 MGGVEKVFKQFFSGGVESFPVLSVYHIRSSRRRKSKEGCYSTEEDSLQSKNVQKPTQKYIKIVTVDNFVFWFMGVLQYQKTIKYLELSWVPIHHGQTNVRKDITVYEGKMKYENKVGSGSFGDLYRGTYCSQDVGIKVLKPERTSTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPSLCIVTVSASTSSSHFLSLSQRLSSLRTRHGFGKHLCAVPQRTVTCGASVREIKETEFKETVLKANCPVLVEFVATWCGPCRLIAPAMESLSKEYEDRLTVVKIDHDANPGLIEEYKVYGLPTLILFKNGQEVPESRREGAITKVKLKEYLDALLESISVS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02767 339 SUPERFAMILY Protein kinase-like (PK-like) 82 184 IPR011009 -
Cca02g02767 339 Pfam Protein tyrosine and serine/threonine kinase 111 187 IPR001245 GO:0004672|GO:0006468
Cca02g02767 339 Gene3D Phosphorylase Kinase; domain 1 99 186 - -
Cca02g02767 339 ProSiteProfiles Thioredoxin domain profile. 195 334 IPR013766 -
Cca02g02767 339 PANTHER THIOREDOXIN X, CHLOROPLASTIC 189 338 - -
Cca02g02767 339 Pfam Thioredoxin 228 330 IPR013766 -
Cca02g02767 339 PANTHER GEO12009P1 189 338 - -
Cca02g02767 339 CDD TRX_family 235 330 - -
Cca02g02767 339 Gene3D Glutaredoxin 227 336 - -
Cca02g02767 339 ProSiteProfiles Protein kinase domain profile. 110 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02767 339 SUPERFAMILY Thioredoxin-like 227 335 IPR036249 -
Cca02g02767 339 SMART tyrkin_6 110 273 IPR020635 GO:0004713|GO:0006468
Cca02g02767 339 PRINTS Thioredoxin family signature 255 264 - -
Cca02g02767 339 PRINTS Thioredoxin family signature 295 306 - -
Cca02g02767 339 PRINTS Thioredoxin family signature 247 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02767 Cca-Chr2 49139354 49148997 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02767 90 184 MAP Kinase Kinase Kinase AT4G38470 63.158 9.31e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Cca02g02767 Thioredoxin 3.1e-28 CL0172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02767 - - gmx:100500584 236.884