Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g02765 | ATGGAGAACGACACCACCGCCGCCGCCGCTAACAATAACGCCACCGCGAAAGTAGGTTCGGAAGGAGTGAAATCGAACAACCATAACCTAGAAGAGGAGCATTCGAATTTGAATGGCgaggagcacatggcagaagaagtggagacagaagaagaggaagatcgagaagcggaagaaggcgaaggagaagCAACTGGATCTGCGCCCAACGCTCGCCAACCTTCTAGAACCCCTTTCACTAATCTCAGCCAGGTCGATGCTGACCTCGCCCTCGCTCGAACCCTTCAGGAGCAGGAAAGGGCATATATGATGCTGAGGATGAATAATGAAGGAAGTGATTATGGAAGTTGGGAAGGCGGAAGCTatttgcatgatgacggggatgattttgatgatctacaggatggtactgatgtggatgaggatgatgacgaagatgacgataatgaggaagagtacgaggatgaagatgcatttgatgtccatgctcatggtagtgccggagaacatgataatCCCAGCATTGAATTTGATCCAGATGTATTTTCAAGTGATGAGGCATATGCAAGAGCTTTACAAGAGGCTGAAGAGAGGGAAATGGCAGCTAGACTGTTGGCTCTTGCTGGGATAAATGATCGTGAGGTGGAGGACATAGAGGAGCATGGTGCTAATTCTCAGGATGCTTGGGAGGATGTTGATCCTGATGAACTTTCATATGAGGAATTACTTGCATTGGGTGAAGTAGTTGGAACTGAGAGCAGAGGTCTTTCGAGTGATACTATTGCTTGTTTGCCTTCAGTCAACTACAAGACTGGGAGTGATCAGCATGGAAGCAATGATTCGTGTGTCATTTGCCGAATGGACTATGAGGATGGTGAGTCCTTGACAGTTCTTTCCTGCAAACATCTGTACCATCCTGAGTGCATTAACAATTGGTTGAAAATAAACAAGGTTTGCCCAGTTTGTAGTACCGAGGTATCTGCTTCTGGGAGCAACTTGTAG | 1002 | 0.3653 | MENDTTAAAANNNATAKVGSEGVKSNNHNLEEEHSNLNGEEHMAEEVETEEEEDREAEEGEGEATGSAPNARQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEGGSYLHDDGDDFDDLQDGTDVDEDDDEDDDNEEEYEDEDAFDVHAHGSAGEHDNPSIEFDPDVFSSDEAYARALQEAEEREMAARLLALAGINDREVEDIEEHGANSQDAWEDVDPDELSYEELLALGEVVGTESRGLSSDTIACLPSVNYKTGSDQHGSNDSCVICRMDYEDGESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSNL | 333 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g02765 | 333 | MobiDBLite | consensus disorder prediction | 68 | 84 | - | - | |
Cca02g02765 | 333 | MobiDBLite | consensus disorder prediction | 44 | 60 | - | - | |
Cca02g02765 | 333 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cca02g02765 | 333 | Pfam | Ring finger domain | 280 | 322 | IPR001841 | - | |
Cca02g02765 | 333 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
Cca02g02765 | 333 | MobiDBLite | consensus disorder prediction | 26 | 43 | - | - | |
Cca02g02765 | 333 | SMART | ring_2 | 282 | 322 | IPR001841 | - | |
Cca02g02765 | 333 | Coils | Coil | 20 | 50 | - | - | |
Cca02g02765 | 333 | PANTHER | E3 UBIQUITIN LIGASE BIG BROTHER-RELATED | 27 | 331 | - | - | |
Cca02g02765 | 333 | MobiDBLite | consensus disorder prediction | 110 | 155 | - | - | |
Cca02g02765 | 333 | PANTHER | E3 UBIQUITIN LIGASE BIG BROTHER-RELATED | 27 | 331 | IPR043312 | - | |
Cca02g02765 | 333 | MobiDBLite | consensus disorder prediction | 128 | 155 | - | - | |
Cca02g02765 | 333 | SUPERFAMILY | RING/U-box | 273 | 327 | - | - | |
Cca02g02765 | 333 | ProSiteProfiles | Zinc finger RING-type profile. | 282 | 323 | IPR001841 | - | |
Cca02g02765 | 333 | CDD | RING-H2_PA-TM-RING | 282 | 322 | - | - | |
Cca02g02765 | 333 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 247 | 329 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g02765 | Cca-Chr2 | 49128779 | 49133122 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g02765 | 57 | 226 | C3H Transcription Factor Family | AT3G19910 | 52.907 | 5.46e-39 | 136 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g02765 | K19045 | - | gmx:100306465 | 480.33 |