LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca02g02763	ATGATGTTGACACATTGCAATGAATTATGCAAGCCAGTTTCTATTATGATTCTAGTTAACTTGGCTCTGGCTTTTGTCAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAGTGGACTACATGTCCATTATAACATATAGACAGGCAATTTCATTTATCTTCATGGCACCTGTGGCCTGCTTCTTTGACAGAAAACACAAACTGGAGCTTCACATAATAAGTCTCCTTTTCCTCAGTGCTCTACTCGGAGTAACATTTCCCCAATACCTATATCTTGTCGGACTTGGATATACTTCTGCCACATTCTCATGTGCGTTCCTCAACATGGTGCCTGTATTTACATTCATTATGGCGGTCCCATTTGGGATAGAGAAGGTGAACATACAAAGCAAGAGTGGTAAAGCAAAAGTCATGGGAACTTTTGTCTGCATTGGTGGAGCCATGTTATTGGTCCTTTATAAAGGAATGCCCCTTATCAATCCACAATCACAACACATGGCAAACAAAATAACAAATACACCACCAACTGCCAAGTTAGCGAAATGGATCATAGGTTCCTTACTTTTGACTGTAGGTTGCCTCTTGTGGTCATCATGGTTCATTATACAAGCAAAGATTAGCAAAAAATACCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTTGCTGCTACTCAATCAGCAATATTAACTTTGATCATCAAGAGAAATAATGCTTCGTGGATTCTCAGAGGCAAGCTAGAAATAATGAGTGTTATATATGCTGTAAGTATATTCTCTACAATAACATGCGTCATTTAA	804	0.3818	MMLTHCNELCKPVSIMILVNLALAFVNLLLKKVLNEGVDYMSIITYRQAISFIFMAPVACFFDRKHKLELHIISLLFLSALLGVTFPQYLYLVGLGYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNIQSKSGKAKVMGTFVCIGGAMLLVLYKGMPLINPQSQHMANKITNTPPTAKLAKWIIGSLLLTVGCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAATQSAILTLIIKRNNASWILRGKLEIMSVIYAVSIFSTITCVI	267

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca02g02763	267	Pfam	EamA-like transporter family	14	151	IPR000620	GO:0016020\|GO:0016021
	Cca02g02763	267	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	46	154	-	-
	Cca02g02763	267	PANTHER	WAT1-RELATED PROTEIN	10	263	IPR030184	GO:0016021\|GO:0022857
	Cca02g02763	267	PANTHER	WAT1-RELATED PROTEIN	10	263	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca02g02763	Cca-Chr2	49113175	49115344	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca02g02763	2	258	Nodulin-like Gene Family	AT3G30340	44.402	2.39e-79	239

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca02g02763	-		-	gmx:100806247	443.351