Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02758 ATGGTGATGGTTGTGATGGAGGCCAACGACAGCTGCGGCAGCGGAGTGCACCTCCTTACCACCACCACCTCGTCGTCGCCGCCGCAGAGCCGCCACCACCGCCAGAAGGTCGAAGTCTACAATGAGATTCTTCGCCGCCTGAAGGATTCCGGCGACCAAGAGGCTACGCAACCTGGCTTTCACGATCAGCTTTGGGCTCACTTCAATCGCCTTCCAACTCGGTATGCGCTGGATGTGAATGTGGAAAGGGCAGCGGATGTTCTTATGCACAAGAGATTATTGCACTTGGCGCATGATCCTGCTAATAGGCCTTCAATTGAAGTTCGATTAGTTCAGGTTCATCCCATATCTGATGGAAACGCAACAGACTCTCTTGAAACAGATGATCCTCGGACAGAGTCTGGTCAAAGTTCTTCAAAGTACTCAAGCAGACAGAGTATACATCCACCTCCTGCTTTTGGCTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGCAAATGATTCTGAAGACATAGAGGAGGAACATTCTGTACATGCCAATGTTCAATATTCACGGCCCATGCATGAAATCACCATCTCAACAGATGACAAGCCAAAGCTTCTTTGTCAGTTAACTGCTTTGCTTGCTGAGATTGGGCTGAACATCCAAGAAGCACATGCCTTTTCCACAATTGATGGTTTCTCATTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAAAAGCTTAAAGCAGCTTTGGAAAGAGAAGTCTTGAAGATTGAGAGACAGGTGAGATCCAGTCCGCAATCAGTATCTTCTGTTGATGAGCCTGATCAAACAAAGATGAAAAGCAAACTGGATCATTTGACAATACCAAATGATGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCATCTGGGTCATATGGCGAACTATTTAAAGGTGTATATTGTAGCCAGGAAGTGGCCATTAAAGTTCTCAAGGCCGAGCATGTAAATTCAGAATTGCAGAGAGAGTTTGCTCAGGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGCCCCCACGCTTATGCATAGTAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTACCTACATAAGCAGAAGGGCTTTTTTAAATTTCCTAACCTGCTCAAAGTAGCTATTGATATTTCTAAAGGAATGAATTACTTGCACCAGCATAACATAATTCATAGAGACTTGAAGGCTGCCAACCTTTTGATGGATGAAAATTGTactgtaaaggttgctgattttggagttgctagagttaaagctcaatctggtgttatgacagcagaaactggaacatatcgatggatggctccagaggttatagaacacaaaccgtatgatcacaaggctgatgtatttagttttggaattgttttatgggagttgctcactggaaagCTTCCATACGAATATTTAACCCCTCTTCAGGCAGCTATAGGGGTGGTTCAAAAGGGTTTACGACCCACCATCCCCAAGAACACTCATCCAAAGTTTGTTGAGCTTCTTGAGAGGTCTTGGCAGCAAGATCCAACATTGAGACCCGATTTCTCCGAAATTATCGAGATCCTGCAGCAGTTAGCAAAGGAGGTCGGAGATGGAGAGGAGAGGCACAAGGATAAATCTGGAGGACTTCTGTCTGTCCTCAGACGAGGTCATCACTAA 1749 0.4014 MVMVVMEANDSCGSGVHLLTTTTSSSPPQSRHHRQKVEVYNEILRRLKDSGDQEATQPGFHDQLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPSIEVRLVQVHPISDGNATDSLETDDPRTESGQSSSKYSSRQSIHPPPAFGSSPNLEALALEANDSEDIEEEHSVHANVQYSRPMHEITISTDDKPKLLCQLTALLAEIGLNIQEAHAFSTIDGFSLDVFVVEGWPYEETEKLKAALEREVLKIERQVRSSPQSVSSVDEPDQTKMKSKLDHLTIPNDGTDVWEIDPKHLKYGTQIASGSYGELFKGVYCSQEVAIKVLKAEHVNSELQREFAQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQKGFFKFPNLLKVAIDISKGMNYLHQHNIIHRDLKAANLLMDENCTVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFSEIIEILQQLAKEVGDGEERHKDKSGGLLSVLRRGHH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02758 582 Gene3D Transferase(Phosphotransferase) domain 1 382 572 - -
Cca02g02758 582 Pfam Protein tyrosine and serine/threonine kinase 303 552 IPR001245 GO:0004672|GO:0006468
Cca02g02758 582 MobiDBLite consensus disorder prediction 560 575 - -
Cca02g02758 582 SUPERFAMILY Protein kinase-like (PK-like) 284 552 IPR011009 -
Cca02g02758 582 CDD STKc_MAP3K-like 309 552 - -
Cca02g02758 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Cca02g02758 582 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 20 564 - -
Cca02g02758 582 Coils Coil 240 260 - -
Cca02g02758 582 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 564 - -
Cca02g02758 582 MobiDBLite consensus disorder prediction 560 582 - -
Cca02g02758 582 SUPERFAMILY ACT-like 188 254 IPR045865 -
Cca02g02758 582 Gene3D Phosphorylase Kinase; domain 1 293 381 - -
Cca02g02758 582 PRINTS Tyrosine kinase catalytic domain signature 377 390 IPR001245 GO:0004672|GO:0006468
Cca02g02758 582 PRINTS Tyrosine kinase catalytic domain signature 414 432 IPR001245 GO:0004672|GO:0006468
Cca02g02758 582 PRINTS Tyrosine kinase catalytic domain signature 460 470 IPR001245 GO:0004672|GO:0006468
Cca02g02758 582 PRINTS Tyrosine kinase catalytic domain signature 479 501 IPR001245 GO:0004672|GO:0006468
Cca02g02758 582 PRINTS Tyrosine kinase catalytic domain signature 523 545 IPR001245 GO:0004672|GO:0006468
Cca02g02758 582 SMART serkin_6 303 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02758 582 MobiDBLite consensus disorder prediction 131 152 - -
Cca02g02758 582 ProSiteProfiles Protein kinase domain profile. 303 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02758 582 ProSiteProfiles ACT domain profile. 190 266 IPR002912 -
Cca02g02758 582 MobiDBLite consensus disorder prediction 117 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02758 Cca-Chr2 49051443 49061049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02758 7 581 MAP Kinase Kinase Kinase AT4G35780 65.217 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Cca02g02758 PK_Tyr_Ser-Thr 2.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02758 - - gmx:100805180 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02758 02 49051443 49061049 Cca02g02758 02 49051443 49061049 ECH