Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02743 ATGACAAGCCATAATttctTCATAGTGTCAAATTTTGTTGGTTTGTGCGAGATCATCTTCATCGTTGGGGTGACGGGTTCGGATGCTGGAGGTAGACAGGATGGACTATTATGGTACAAAGACACGGGGCAGCACTTGAATGGTGAATTTTCAATGGCTGTAATACAAGCTAACAACTTGCTGGAAGATCAGAGCCAGATTGAATCAGGCAGTTTGAGCTCCAACGAATCTGGCCCTTATGGTACCTTCATCGGTATCTATGATGGCCATGGAGGGCCTGAAACATCGCGGTTTATCAATGATCACCTATTTCACCATCTCAAGAGATTTACTTCAGAGCAGCAATCGATGTCGGTGGATGTAATTCGCAAGGCACTCCAAGCAACAGAAGAGGGGTTTATGTCAGTGGTTGCCAGACAATGGTCCATGTCGCCTCAAATAGCAGCTGTTGGTTCATGTTGTCTTGTTGGTGTTATTTGTAGTGGAACGCTTTATATAGCAAACCTTGGGGATTCCCGGGCAGAGCTGCATTCTTTGCATCCTGATGATCCAAATATCGTGGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCCTTATTCAAGTTTCTAAATCCATTGGTGATGTATATTTGAAAAAGGCGGAGTTCAATAGAGAACCACTATATGGCAAGTTTCGACTTCGGGAACCGATCAAGTGGCCAATACTGAGCTCCGAACCATCGATATCAGTGCATCATTTGCAGCCACACGATCAATTTATTATATTCGCATCTGATGGACTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAGCCCCCGCAGTGGAAGTGCAAGGAGGCTGGTGAAAGCTGCTCTTCAAGAAGCTGCAAAGAAGAGAGAAATGAGATATTCAGATTTAAAGAAAATTGACCGCGGAGTTCGGCGTCATTTCCATGATGATACCACGGTGATTGTTGTGTATCTTGACTCAAATCTGGTAATGTATTCAAGTGTTGGAAAGTGGAGAGGAAAATCACCATCTAGATGA 1044 0.4368 MTSHNFFIVSNFVGLCEIIFIVGVTGSDAGGRQDGLLWYKDTGQHLNGEFSMAVIQANNLLEDQSQIESGSLSSNESGPYGTFIGIYDGHGGPETSRFINDHLFHHLKRFTSEQQSMSVDVIRKALQATEEGFMSVVARQWSMSPQIAAVGSCCLVGVICSGTLYIANLGDSRAELHSLHPDDPNIVVLKHNVWRVKGLIQVSKSIGDVYLKKAEFNREPLYGKFRLREPIKWPILSSEPSISVHHLQPHDQFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVYLDSNLVMYSSVGKWRGKSPSR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02743 347 Gene3D - 39 175 IPR036457 -
Cca02g02743 347 Gene3D - 176 334 IPR036457 -
Cca02g02743 347 CDD PP2Cc 50 327 IPR001932 -
Cca02g02743 347 ProSiteProfiles PPM-type phosphatase domain profile. 49 327 IPR001932 -
Cca02g02743 347 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 25 175 - -
Cca02g02743 347 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 173 337 - -
Cca02g02743 347 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Cca02g02743 347 SUPERFAMILY PP2C-like 58 328 IPR036457 -
Cca02g02743 347 PANTHER ALPHABET, ISOFORM E-RELATED 25 175 - -
Cca02g02743 347 PANTHER ALPHABET, ISOFORM E-RELATED 173 337 - -
Cca02g02743 347 SMART PP2C_4 41 325 IPR001932 -
Cca02g02743 347 Pfam Protein phosphatase 2C 73 178 IPR001932 -
Cca02g02743 347 Pfam Protein phosphatase 2C 190 296 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02743 Cca-Chr2 48911240 48915640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02743 25 337 PP2C-type Phosphatase Gene Family AT4G38520 69.971 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02743 - K01102 gmx:100790374 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02743 02 48911240 48915640 Cca02g02743 02 48911240 48915640 ECH