Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02724 ATGCAGAAACTTAAGGAGAACACCAATTTACTTATTGAAATTGATATTGATGCACTGCTCGAGAAAGACTTGTTGACTCTAGATGAGGCCATGAAGACTGCTAATGATGCAGTTTTGCTAGCTATTAAGGCTGTCTCTGTTCTAAAATCTGAGGTGCACAGGAAATTTATAGATAGATTGAATGATAGCATGAAAGAGGCCAGGACTTCAGAAATTAATGGAATATTGAAATCCTATAAAGAAGCAGGGATTGGATTTGGAGCTGCATATAATTTCGAAGCTTCAATTTTGCAGTCTATATTTGATAGTCCTTTCCTGGGTGTTAGTTTGAAGGATCCAAATAGCATAGTTATATGCGTTGTTGCGTGTTCAGTGCCCATCAATGATAGTGATATAGCAATCTTTCTGCGAACTTTCCGTCAAACAACAGAATACACAAATGATATTATAATATCAACAGTACATGACCCTACTGTTGAGCCAAACCTGCTCATAACAACAGTACTTACACTCGGTTGTTCAGATGTGCAACGGTCTTCCCAGAATGTTGGTATACTGTCCAGACTTGCCATGCGTTTTCCTCTTATTTTTAACTTCTGGGGAAGACATAATCAGCAACAAGTTGGCACTGGGAAACAGACTGAAGTATTTCCTCATGAAGTGATGAGTTCTGATGACATTGACAAGAATACAAATAAAATTGCTACTGAGAACATGGATAACAATCTTGACAAATATTATGTAGAGTTGGAGCCACCAATGAGCAACAGCAGCTCAAAGTTGTCTGCATCAAGGGATTCTGGGAAGAATGAAGAAGTTTTATTTGACACCACATCCAGTTATAACATCCTTTATGACTCTATTACTGAAGGAGGTGACTCTGTTTTTCAAAGGGAACAACTTGAGAACTGGAATCTAGGTCCTGGATTTGAGGTGGCAAAGGAGTGGGCCCAAGAAAAAGCAGCTGATGCGACACCCATTGTTGATAACCTAAGCATCTTCCACCTTCCTGTTGGTGTGAGGTCTTCAGAAGGGTTGAAAGACTGTTTGGAAATCTCCTTTATAACCAAACAGCATGAGCTGGATACTGATAATGATTTGAAAGCACAAACATTAAATGGAGGTATGTCTCCTTGGAGTGCAGCGACTGATGCAGGTTTGGAAGCAGTGGTGGAATTTGCATCTTCAATTTTGAAAGGAAAGAATGCTAATAAATTAAAGAAACATGGAGTTCTATCTGTTCGTGCTGCGTCCATGTTGGAGGCAGAACGTGACGTGTCAAAAAAGTGGAGTCCTGTTGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTTCCTGAAGGGAAGGGGCGTCTTGTTCTCAGAGATGGAAGTATATATGATGGTTTATGGCGCTATGGGAAGAGATCTGGTCCTGGTACATTCTATTTCAAAAATGGAGACATGTTTCAAGGATCATGGAGGGATGATGTTATACACGGCAAGGGTTGGTTTTATTTTCACACGGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCTAATGGTGAGGGACGGTTCTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGATGGATGGCGCCATGGGCAGTTTCTTTGTATTAATGCGAATGGGACAAGGTACACTGAAATTTGGGAACATGGTGTTCTTGTAGATAGCAAGCATTTAGACAAATGA 1728 0.4074 MQKLKENTNLLIEIDIDALLEKDLLTLDEAMKTANDAVLLAIKAVSVLKSEVHRKFIDRLNDSMKEARTSEINGILKSYKEAGIGFGAAYNFEASILQSIFDSPFLGVSLKDPNSIVICVVACSVPINDSDIAIFLRTFRQTTEYTNDIIISTVHDPTVEPNLLITTVLTLGCSDVQRSSQNVGILSRLAMRFPLIFNFWGRHNQQQVGTGKQTEVFPHEVMSSDDIDKNTNKIATENMDNNLDKYYVELEPPMSNSSSKLSASRDSGKNEEVLFDTTSSYNILYDSITEGGDSVFQREQLENWNLGPGFEVAKEWAQEKAADATPIVDNLSIFHLPVGVRSSEGLKDCLEISFITKQHELDTDNDLKAQTLNGGMSPWSAATDAGLEAVVEFASSILKGKNANKLKKHGVLSVRAASMLEAERDVSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLRDGSIYDGLWRYGKRSGPGTFYFKNGDMFQGSWRDDVIHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRYTEIWEHGVLVDSKHLDK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02724 575 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 440 568 - -
Cca02g02724 575 SMART morn 487 508 IPR003409 -
Cca02g02724 575 SMART morn 533 554 IPR003409 -
Cca02g02724 575 SMART morn 441 462 IPR003409 -
Cca02g02724 575 SMART morn 464 485 IPR003409 -
Cca02g02724 575 Gene3D Tubulin/FtsZ, GTPase domain 1 171 IPR036525 -
Cca02g02724 575 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 61 575 - -
Cca02g02724 575 Gene3D - 441 502 - -
Cca02g02724 575 Pfam MORN repeat 536 547 IPR003409 -
Cca02g02724 575 Pfam MORN repeat 466 488 IPR003409 -
Cca02g02724 575 Pfam MORN repeat 448 464 IPR003409 -
Cca02g02724 575 Pfam MORN repeat 516 533 IPR003409 -
Cca02g02724 575 Pfam MORN repeat 489 511 IPR003409 -
Cca02g02724 575 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 61 575 - -
Cca02g02724 575 Gene3D - 514 573 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02724 2 574 PP2C-type Phosphatase Gene Family AT1G75010 47.826 1.58e-177 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02724 - - gsj:114371951 1019.61