Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02695 ATGATGTTGACACATTGCAATGAATTATGCAAGCCAGTTTCTATTATGATTCTAGTTAACTTGGCTCTGGCTTTTGTCAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAGTGGACTACATGTCCATTATAACATATAGACAGGCAATTTCATTTATCTTCATGGCACCTGTGGCCTGCTTCTTTGACAGAAAACACAAACTGGAGCTTCACATAATAAGTCTCCTTTTCCTCAGTGCTCTACTCGGAGTAACATTTCCCCAATACCTATATCTTGTCGGACTTGGATATACTTCTGCCACATTCTCATGTGCGTTCCTCAACATGGTGCCTGTATTTACATTCATTATGGCGGTCCCATTTGGGATAGAGAAGGTGAACATACAAAGCAAGAGTGGTAAAGCAAAAGTCATGGGAACTTTTGTCTGCATTGGTGGAGCCATGTTATTGGTCCTTTATAAAGGAATGCCCCTTATCAATCCACAATCACAACACATGGCAAACAAAATAACAAATACACCACCAACTGCCAAGTTAGCGAAATGGATCATAGGTTCCTTACTTTTGACTGTAGGTTGCCTCTTGTGGTCATCATGGTTCATTATACAAGCAAAGATTAGCAAAAAATACCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTTGCTGCTACTCAATCAGCAATATTAACTTTGATCATCAAGAGAAATAATGCTTCGTGGATTCTCAGAGGCAAGCTAGAAATAATGAGTGTTATATATGCTGGATTGGTAGGGTCAGGATTGTGCTACGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTCACCGCAGCTTTTACCCCCCTTATACAAATATTTGTAGCTGTGCTTGATTTCTATGTACTAAAGGAGGAAATTTACCTGGGAAGTATTGCAGGATCTGCCTTGGTTATTGCTGGCATGTATATTCTTCTATGGGGAAAAAGTAAAGAGGAAGGGCAACATGTTCTGAAGGATACGCAAACAAATCAAGATGTAGAATGCCAATAG 1041 0.3958 MMLTHCNELCKPVSIMILVNLALAFVNLLLKKVLNEGVDYMSIITYRQAISFIFMAPVACFFDRKHKLELHIISLLFLSALLGVTFPQYLYLVGLGYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNIQSKSGKAKVMGTFVCIGGAMLLVLYKGMPLINPQSQHMANKITNTPPTAKLAKWIIGSLLLTVGCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAATQSAILTLIIKRNNASWILRGKLEIMSVIYAGLVGSGLCYVAMSWCVKQRGPVFTAAFTPLIQIFVAVLDFYVLKEEIYLGSIAGSALVIAGMYILLWGKSKEEGQHVLKDTQTNQDVECQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02695 346 PANTHER WAT1-RELATED PROTEIN 10 344 - -
Cca02g02695 346 PANTHER WAT1-RELATED PROTEIN 10 344 IPR030184 GO:0016021|GO:0022857
Cca02g02695 346 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Cca02g02695 346 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Cca02g02695 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Cca02g02695 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02695 Cca-Chr2 48347001 48349170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02695 12 328 Nodulin-like Gene Family AT1G11460 38.750 3.11e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02695 - - gmx:100806247 609.372