Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02694 ATGGGAAAGAAAGCTTTGAAGCTTCCCTCTCTTTTCAAAAGCAAGGAGCCACCAACAACAAAGCATCATCATAGTCACCATCCATGGCAGTTCATACCCTCTTGTGGCCACTCAAAGACCCTTTCATTCAGAGGCAGAGATGATGACATCTTCAAGACGGTTAACTCGGTGTTCTTTGACCATTCAGAGAGTGTTATTGAGACTCCAAAGTCGTGGTTCACAACCTCATCCGAATCTGCAAGCATCTCAACCGAGTCAGAAGAGTACTACCATTGTGATGGTGAGTCTTTGGAGATGTTGGTACGTGGAGTGAGGTCAGAGAGGTTGTTCTTCGAACCTGGTGACACAAGCTCCATTTTGGAAAAGGCTAAAGCAAGTGGTTTTCCCTTCAAGGAAAGTGTGGTCCTTGCTATGGAATCAGAGGACCCTTATGAGGACTTTAAGAGATCGATGGAGGAGATGGTTGAGTCTCATGGAGTGAGGGATTGGGAGGGGTTGGAGGAGCTTTTGAGTTGGTACTTGAGGGTCAATGGAAGGAACAATCATGGGTTTATAGTGGGTGCTTTTGTGGATTTACTCTTCAGTATAGCAGcttctaatactacttctaaatcttgttctcatcattcaacttcctattcttctgctgtttcttcttttgcttcttcACCCTTGTGTGGCCAGAATCATGAGATTGTTGAGCATGTCCATGAACATGATGATGCTGTAACAACGTCTTAG 741 0.4089 MGKKALKLPSLFKSKEPPTTKHHHSHHPWQFIPSCGHSKTLSFRGRDDDIFKTVNSVFFDHSESVIETPKSWFTTSSESASISTESEEYYHCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLSWYLRVNGRNNHGFIVGAFVDLLFSIAASNTTSKSCSHHSTSYSSAVSSFASSPLCGQNHEIVEHVHEHDDAVTTS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02694 246 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 225 IPR038933 GO:0045892
Cca02g02694 246 Pfam Transcriptional repressor, ovate 140 196 IPR006458 -
Cca02g02694 246 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 134 196 IPR006458 -
Cca02g02694 246 MobiDBLite consensus disorder prediction 1 28 - -
Cca02g02694 246 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 225 - -
Cca02g02694 246 ProSiteProfiles OVATE domain profile. 136 195 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02694 Cca-Chr2 48337455 48338438 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Cca02g02694 Ovate 7.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02694 - - vun:114190765 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00614 02 13701037 13702046 Cca02g02694 02 48337455 48338438 ECH
Cca03g02564 03 46944005 46945289 Cca02g02694 02 48337455 48338438 ECH
Cca02g02694 02 48337455 48338438 Cca02g02694 02 48337455 48338438 ECH