Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02689 ATGGCGGTTGCAAGCATGTTCGACACGAAGGGTCTGATGGTCGAAGTGATAACGGGGCGGTGGTTCGTGGTGTTCGCGTCGTTCCTAATCATGGCGGCGGCCGGCGCCACCTACATGTTCAGCCTCTACTCCGGCGACATAAAATCGGCCCTCGCCTACGACCAAACCACCCTCAACCTCCTGAGTTTCTTCAAAGACTTGGGCGGCAATGTCGGCGTTCTCTCCGGCCTCATCAACGAGATAACTCCGCCGTGGGTGGTCCTCGCCATGGGCTCACTCCTCAACTTCTTCGGCTACTTCATGATATGGCTCGCCGTCACCAAAAGAATCCCCAAACCCCACGTGTGGCACATGTGCCTCTACATCTGCATTGGCGCCAACTCTCAATCCTTCGCCAACACCGGTTCCTTAGTCACGTGCGTCAAGAACTTCCCCGAGAGTCGCGGGGTGGTCTTGGGAATCCTCAAAGGCTACGTTGGTCTGAGCGGAGCCATCATAACGCAACTCTACTTCGCCTTTTACTACAACGATTCCAGGTCTTTGATTCTCCTCATAGCTTGGCTTCCAGCCGCTATTTCCTTTCTTTTCCTCAGAACCATTCGCTACATGAAGCCGCTTCGACAACCTAACGAGCTTAGTGTTTTCTACAAGTTTTTGTATATCTCACTTGGCCTCGCTGGCTTTCTCCTTGTCATGACCCTCGTTCAGAAGAAGGCGAATTTCTCCCAGAGTGAATATGGACTAAGTGCTGGCGTTGTGCTTTTTCTGCTCTTCCTCCCTCTCGCTGTTGTTTTTGTTGAACAATATAAGACGAGGGAGATTCGTAAGCTGGCATTCGCTGACCCCTCCCCGGTGAAGGTAGTAGCTGAAAGAGAGTTAGTAGAGTCTGCAACTGCAACTACGAGGGTTGAAGTTGAAGTTGAAGAAACTAGATGGTGGCAGAAAGTGTTTACTCCACCGCCTAGAGGGGAGGACTATACTATACTCCAAGCACTTTTCAGCTTGGACATGATACTTGTATTCTTCGCAGGCACATGTGGTGTTGGAGGCACTTTGACCGCGATTGATAACCTTAATCAGATTGGTACCGCACTAGGGTACCCCAAGTCTAGCATAAGCACGTTTGTGTCGTTGGTGAGCATTTGGAACTATCTGGGGCGGGTTTTTTCGGGGTTTGTTTCTGAACACTTTCTTCAAAAGTACAAGTTTCCTCGACCACTCATGCTCACGCTAATCCTCCTCTTATCCTGTGTCGGTCACCTTCTCATAGCCTTTGACGTGCCTAACGGGCTCTACGTGGCCTCGGTGATCATTGGCTTCTGTTTTGGCGCGCAATGGCCCTTGGTGTTTGCTATAATTTCTGAACTGTTTGGGCTCAAGTACTACTCCACGTTGTACAACTTCGGCGGTGTGGCGAGCCCAATTGGGCTTTACGTGCTTAACGTGAGGGTGACGGGGCACTTGTATGACAAGGAAGCTTTGAGACAATTGGCTTCGGCGGGGATCTCGAGAGCGAGTGGGAAGGAATTGGACTGTCTTGGGGCCACTTGTTTCAAGTTGTCTTTTATTATTATCACTGCAGCGACCTTTTTTGGTGCCATAATTTCACTCATTTTGGTGGCAAGAACAATTAAGTTCTATAAAGGTGATATATACAAGAGATATCGACACGAAGATGATGAGATTGCGGTGGTCCAAAACGGCGGCCAGAGAGGTTAA 1719 0.4985 MAVASMFDTKGLMVEVITGRWFVVFASFLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVVLAMGSLLNFFGYFMIWLAVTKRIPKPHVWHMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYFAFYYNDSRSLILLIAWLPAAISFLFLRTIRYMKPLRQPNELSVFYKFLYISLGLAGFLLVMTLVQKKANFSQSEYGLSAGVVLFLLFLPLAVVFVEQYKTREIRKLAFADPSPVKVVAERELVESATATTRVEVEVEETRWWQKVFTPPPRGEDYTILQALFSLDMILVFFAGTCGVGGTLTAIDNLNQIGTALGYPKSSISTFVSLVSIWNYLGRVFSGFVSEHFLQKYKFPRPLMLTLILLLSCVGHLLIAFDVPNGLYVASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGVASPIGLYVLNVRVTGHLYDKEALRQLASAGISRASGKELDCLGATCFKLSFIIITAATFFGAIISLILVARTIKFYKGDIYKRYRHEDDEIAVVQNGGQRG 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02689 572 Pfam Nodulin-like 20 265 IPR010658 -
Cca02g02689 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 567 - -
Cca02g02689 572 CDD MFS_Mch1p_like 19 533 - -
Cca02g02689 572 Gene3D MFS general substrate transporter like domains 333 547 IPR036259 -
Cca02g02689 572 SUPERFAMILY MFS general substrate transporter 20 545 IPR036259 -
Cca02g02689 572 PANTHER MFS TRANSPORTER 5 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02689 Cca-Chr2 48279359 48281504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02689 10 558 Nodulin-like Gene Family AT2G39210 68.345 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02689 - - ccaj:109796704 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02689 02 48279359 48281504 Cca02g02689 02 48279359 48281504 ECH