Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02688 ATGGCGGTTGTGGGAGGAGCAGGTTCCATGGGTGTTCATGGATGGGGAGACATGAAGAGTCTCACCGTCCAAGTCATCACCGGCCGTTGGTTTGTTGTGTTTGCATCCTTTCTAATCATGGCTGCTGCCGGAGCCACGTACATGTTTGGTCTCTATTCCAGTGACATCAAAACCACCCTTGGTTACGACCAAACCACTCTCAACCTCCTCAGTTTCTTCAAGGACTTGGGTACCAACGTTGGCGTCCTCTCAGGCCTAATCAACGAGCTCACCCCACCTTGGGTCGTCCTAGCCATCGGTGCCATCCTAAACTTCTTTGGCTACTTCATGATATGGCTATCAGTGACCAAAAGAATAGCCAAACCCCAAGTGTGGCAAATGTGTCTCTACATCTGCATAGGTGCCAACTCTCAGTCCTTCGCCAACACGGGTTCCCTTGTCACTTGTGTCAAGAACTTCCCAGAAAGTCGCGGGGTTGTGTTAGGCATCCTCAAAGGCTATGTGGGTCTTAGTGGTGCAATCATCACACAACTATACTCTGCCATTTACTATGATGACACCAAGGCTTTGATTTTGCTCATAGGATGGCTCCCAGCTGCTATTTCCTTTGCTTTCCTTCGAACCATTCGGTACATGAAGCCGGTTAGGCAACCTAATGAGCTCAAGGTTTTCTACAATTTTCTCTATATTTCTCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATCATTATACAGAAAAGGGTCAACTTCACTCAGAGTGAGTTTGGTGTGAGCGCTGCTATAGTGCTCTTCTTGCTCTTCCTCCCACTTGCTATTGTTTCTATCGAAGAATATAAGATATGGCAAAGTAAAAGGCTTGCTTTGGTTGACCCCTCGCCCGTGAAAATAGTAACCGAGGCTGAAAAGGTCAAGTCGAATAAGAATGGGAAAAACAATTCAGTTTCAACAGTTTCCAACAACACCAAGTGGTACGAAAATGTGTTTAGTCCTCCAGAAAGAGGTGAGGACTATACAATACTTCAAGCGCTATTCAGCATCGACATGTTAATACTATTCATATGTAGCATCTGTGGTATTGGGGGCACGTTGACCGCAATAGATAATCTGGGTCAGATAGGAAAGTCGCTTAGATACCCCAAGAAAAGCATAAGCACTTTCGTCTCTCTAGTGAGCATTTGGAATTATTTAGGACGGGTTTTCTCTGGATTTGTTTCGGAACATTTTCTACAAAAGTACAAGTTCCCTCGTCCTCTTATGCTCACTTTAACCATGCTCTTATCATGTGTCGGTCACCTTCTGATAGCATTTGATGTGCCAAATGGTCTTTATGCGGCTTCCGTAATAATTGGATTTTGTTTTGGCGCTCAGTGGCCTTTACTTTTTGCCATTATATCTGAGCTTTTTGGACTTAAATATTATGCAACTTTGTACAATTTTGGAAGCGCAGCAAGTCCACTAGGGCTATACGTGCTTAATGTAAAGATGACCGGACATTTGTATGATAAAGAAGCGAAGAAGCAACTTGCAGCATTGGGGCTTGAAAGAAGGGAAGGACAGGAATTGAATTGTATTGGGGTCCATTGCTTCAAGTTATCCTTCATTATTATGACTGCTGCAACTTTCTTTGGTGCCATTGTTTCGATCATTTTGGTGGCTAGGACAAGAAGGTTTTACAAAAGTGACATATACAAGAGATTCCGGGAAGCCACGACGGTGGCAGAAGCTGAAATGACAGGGGAGGAGAATGAAAACAAAGCAGAGAAAGATGACAAAAATGTGGTGCCAACTCAAAAGTAA 1797 0.4407 MAVVGGAGSMGVHGWGDMKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSSDIKTTLGYDQTTLNLLSFFKDLGTNVGVLSGLINELTPPWVVLAIGAILNFFGYFMIWLSVTKRIAKPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYSAIYYDDTKALILLIGWLPAAISFAFLRTIRYMKPVRQPNELKVFYNFLYISLGLAGFLLVMIIIQKRVNFTQSEFGVSAAIVLFLLFLPLAIVSIEEYKIWQSKRLALVDPSPVKIVTEAEKVKSNKNGKNNSVSTVSNNTKWYENVFSPPERGEDYTILQALFSIDMLILFICSICGIGGTLTAIDNLGQIGKSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLQKYKFPRPLMLTLTMLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSAASPLGLYVLNVKMTGHLYDKEAKKQLAALGLERREGQELNCIGVHCFKLSFIIMTAATFFGAIVSIILVARTRRFYKSDIYKRFREATTVAEAEMTGEENENKAEKDDKNVVPTQK 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02688 598 Pfam Nodulin-like 29 273 IPR010658 -
Cca02g02688 598 Gene3D MFS general substrate transporter like domains 341 559 IPR036259 -
Cca02g02688 598 SUPERFAMILY MFS general substrate transporter 29 557 IPR036259 -
Cca02g02688 598 MobiDBLite consensus disorder prediction 578 598 - -
Cca02g02688 598 MobiDBLite consensus disorder prediction 575 598 - -
Cca02g02688 598 PANTHER MFS TRANSPORTER 12 598 - -
Cca02g02688 598 CDD MFS_Mch1p_like 28 544 - -
Cca02g02688 598 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02688 Cca-Chr2 48268502 48270478 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02688 16 568 Nodulin-like Gene Family AT2G39210 73.703 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02688 - - pvu:PHAVU_007G024800g 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02688 02 48268502 48270478 Cca02g02688 02 48268502 48270478 ECH