Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02686 ATGGCGGTTGTGGGAGGTGTTCGTGGATGGGGAGACATGAAGAGTCTCACCGTCCAAGTCATCACCGGTCGTTGGTTTGTGGTGTTTGCCTCCTTTCTTATCATGGCAGCCGCAGGAGCCACCTACATGTTTGGCCTCTATTCCAGTGAAATCAAAACCACCCTTGGTTACGACCAAACCACTCTCAACCTCCTCAGTTTCTTCAAGGACTTTGGCAGCAACGTTGGTGTCCTGGCAGGCCTACTCAACGAGCTCACCCCACCCTGGGTGGTTCTAGCCATTGGTGCCATCCTAAACTTCTTTGGCTACTTCATGATATGGCTATCAGTGACCAAAAGAATAGCCAAACCCCGAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCCAACTCTCAATCCTTCGCCAACACTGGTTCCCTTGTCACTTGTGTCAAGAACTTCCCAGAAAGTCGTGGGGCTGTGTTAGGCATCCTCAAAGGCTATGTGGGTCTTAGTGGTGCAATCATCACACAGCTATACTCTGCTATTTACTATGATGACACTAAGGCTTTGATTTTGTTCATAGGTTGGCTCCCGGCTGCTATTTCCTTTGCTTTTCTTCTAACCATTCGATACATGAAGCCAGTTAGGCAACCTAATGAACTCAAGGTTTTCTACAATTTTCTCTATATTTCTCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATCATTGTACAGAAAAGGGTCGACTTCACTCAGAGTGAGTTTGGTGTGAGTGCTGCTATAGTGCTCTTCTTGCTCTTCTTCCCACTTGTTGTTGTTTCCATGGAAGAATATAAGACCTGGCAGAGTAAAAGGCTTGCTTTAGTTGATCCATCTCCGGTTAAAATAATAACTGAGGCTGAAATTGTCAAGGCAAATGAGAATGGGAATAAAAATTCAGTTTCAACAGTTTCCAATGACATCAAGTGGTGGCAAAATGTGTTTAGTCCACCTGAAAGAGGTGAGGACTATACAATACTTCAAGCGTTATTCAGCGTTGACATGTTTATACTTTTCATAACTTGCATCTGTGGTGTTGGGGGCACGTTGACCGCAATAGATAATCTGGGTCAGATAGGAACATCGCTTAGGTACCCCAAGAAAAGTATAAGCACTTTTGTGTCTCTAGTGAGTATTTGGAATTATCTAGGACGGGTTTTCTCAGGATTTGTTTCTGAACATTTTCTACAAAAGTACAAGTTCCCTCGTCCTCTTATGCTTACTTTAACTCTGCTCTTGTCATGTATTGGTCACCTTCTGATAGCATTTGATGTGCCAAGCGGTCTTTATGCGGCTTCGGTTATAATTGGGTTTTGTTTTGGCGCTCAGTGGCCATTACTTTTTGCCATTATATCCGAGCTTTTTGGACTTAAATATTACGCAACCTTGTATAATTTTGGAAGTGTAGCAAGTCCCCTAGGGCTATATGTGCTTAATGTGAAAATGACTGGGCATTTGTATGATGAAGAAGCAAAGAAGCAACTTGCAGCATTGGGGATTAAAAGAAAGGAAGGGCAAGAATTGAATTGTATTGGGGTCAATTGTTTCAAGTTATCCTTTATTATCATCACTGCTGCAACTTTCTTCGGTGCCATTGTTTCGCTCATTTTGGTGGCTAGGACAAGGAAGTTTTACAAAAGTGACATATACAAGAGATTCCGGGAAGCGGCGACGGTGGCAGAAGCTGAAATGGCGACGGTGGAGAACGAGAGCAAGGCAGAGAAAGATGCCAACCATTCTGTGCCAACTCAAACATAA 1782 0.4371 MAVVGGVRGWGDMKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSSEIKTTLGYDQTTLNLLSFFKDFGSNVGVLAGLLNELTPPWVVLAIGAILNFFGYFMIWLSVTKRIAKPRVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFAFLLTIRYMKPVRQPNELKVFYNFLYISLGLAGFLLVMIIVQKRVDFTQSEFGVSAAIVLFLLFFPLVVVSMEEYKTWQSKRLALVDPSPVKIITEAEIVKANENGNKNSVSTVSNDIKWWQNVFSPPERGEDYTILQALFSVDMFILFITCICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLQKYKFPRPLMLTLTLLLSCIGHLLIAFDVPSGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKMTGHLYDEEAKKQLAALGIKRKEGQELNCIGVNCFKLSFIIITAATFFGAIVSLILVARTRKFYKSDIYKRFREAATVAEAEMATVENESKAEKDANHSVPTQT 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02686 593 Coils Coil 558 578 - -
Cca02g02686 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 592 - -
Cca02g02686 593 CDD MFS_Mch1p_like 23 539 - -
Cca02g02686 593 PANTHER MFS TRANSPORTER 7 592 - -
Cca02g02686 593 SUPERFAMILY MFS general substrate transporter 24 552 IPR036259 -
Cca02g02686 593 Pfam Nodulin-like 24 268 IPR010658 -
Cca02g02686 593 Gene3D MFS general substrate transporter like domains 339 554 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02686 Cca-Chr2 48258302 48260180 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02686 11 563 Nodulin-like Gene Family AT2G39210 73.477 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02686 - - pvu:PHAVU_007G024800g 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02686 02 48258302 48260180 Cca02g02686 02 48258302 48260180 ECH