Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g02640 | ATGGTTGCGCTTCATGCGTGTGGCGTGGTCTTGTTTGCATGGGTCGTGCAAGCGGTATCGGGTGGGAGCTGCCCCTCTTTGATTGGCTGCGGCAATATCGGTAACATCACTTTTCCTTTCACCGACACACGTCATCCTCACTGTGGCATACTGGTGATATATGGCTGTGATGAGAAGGAACCAGAGACCAAAAAAACCATTAAAAATAACAACCGATGGTTCGATATTGTAAGGCTTGAGGAGCAGTTTTCGATTGTCATTAGAGACGATAAACTCCACGACCTCTTGCTACAAAGAAGTTGCGAGACCTTCGACCAGCAAAAAACTGCTTTCACAGTCAACACACCTTTGGCCCTCTCTCATGTAAACTATAACATAGACATATTCAGATGTAAACACGCCCTCCACGATCCGCCACACAATTATGTTTCTAATTCTACACTTTGCAAAAATGACACACTCTATTCCAGGTTCGTAATTGACCCCTCCAGAGACAATCATGATATCAAAGGATGTTCAATGGTTCGGCTTCCAACCACCGCCCAGGTTAGCCAGCTTCAGCTTAATCACACTGACCTTTTCAATATCTTAACGGATGAAATCGCCGTCCAAATAGAGTTAACTCGGGATTGTTCTACTTGTCACTTTGCCCACGCTGGCCAATGTCGCCTTGACAACACCGGAAAATTTTATTGTCACAAAGGGAAATCTATAAAGACTCGTCTTATAGTGGCAAGTGTATCTGGCGCTGGAGCCGTAGGAGTTGTGATATTTCTGGTTTGGTGCATTAGAAGAAGGTTTTACAAGAATAAAAACCCCACCCACCAAATAATCGAGATGTTTCTGAACACCCACGGTCACCTTGCAGCCAATAGATACAGTTATTCAGAGATAAAGAAGGCCACCAACTCCTTCAAAAACAAATTGGGTGAAGGAGGGTATGGTAGTGTTTACAAGGGGAGGCTACATGATGGAAGTCTTGTGGCTGTAAAAGTTTTAAGCGACTCCAAAGGTAACGGCGAGGAATTTATCAATGAAGTTGCTAGCATCAGTGTCACTTCTCATGTTAACATCGTTACTTTACTCGGATTTTGTCTACAAGGTTCCAAAAGAGCTTTGATTTACAAGTACATGCCCAATGGCTCACTTGAGAAGTTCATATATGAAGAAAAGGATCCACTCAAGCTCAGTCTTCAATTAAGTTGCAAAACCATCTATAATATTGCAATTGGCGTTGCTCGTGGATTAGAGTACTTACACAGAGGTTGCAATACTAAAATCTTGCATTTTGATATAAAACCTCACAATATATTGCTAGATGAGGATTTCTGCCCAAAGATTTCAGATTTTGGGCTAGCTAAAATATGTCCACAAAAAGAAAGCATTGTATCCTTATTGGGAACCAGGGGCACTGCGGGATACATTGCTCCTGAGGTTTTCTCTAGAAATTTTGGAGGAGTCTCCCATAAATCAGATGTATACAGCTACGGAATGATGGTTTTGGAAATGGTTGGGGGAAGGATGAATAACAATGTTGAAGTTGAATGTTCAAGTGAAATATATTTCCCACATTGGGTTTACAAGCGTCTTGAACTGAATCAGGAGCCTAGTTTGCGAAGCATAAAAAATGAAACTGATAAAGAAATGATACGAAAGTTGATTATAGTGAGCTTATGGTGCATCCAAACAGACCCTTCAAATAGGCCAGCAATGAGGAATGTGGTAGATATGATGGAAGGAAGCATGGAGTCCTTGCAAATACCACCAAAACCTTATCTCTCTTCACCTCCGAGATCCTCAGATCACAACACCCACACATCTCAGACTACGTTTCCTTCAGAGTACTAA | 1848 | 0.4199 | MVALHACGVVLFAWVVQAVSGGSCPSLIGCGNIGNITFPFTDTRHPHCGILVIYGCDEKEPETKKTIKNNNRWFDIVRLEEQFSIVIRDDKLHDLLLQRSCETFDQQKTAFTVNTPLALSHVNYNIDIFRCKHALHDPPHNYVSNSTLCKNDTLYSRFVIDPSRDNHDIKGCSMVRLPTTAQVSQLQLNHTDLFNILTDEIAVQIELTRDCSTCHFAHAGQCRLDNTGKFYCHKGKSIKTRLIVASVSGAGAVGVVIFLVWCIRRRFYKNKNPTHQIIEMFLNTHGHLAANRYSYSEIKKATNSFKNKLGEGGYGSVYKGRLHDGSLVAVKVLSDSKGNGEEFINEVASISVTSHVNIVTLLGFCLQGSKRALIYKYMPNGSLEKFIYEEKDPLKLSLQLSCKTIYNIAIGVARGLEYLHRGCNTKILHFDIKPHNILLDEDFCPKISDFGLAKICPQKESIVSLLGTRGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMVLEMVGGRMNNNVEVECSSEIYFPHWVYKRLELNQEPSLRSIKNETDKEMIRKLIIVSLWCIQTDPSNRPAMRNVVDMMEGSMESLQIPPKPYLSSPPRSSDHNTHTSQTTFPSEY | 615 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g02640 | 615 | MobiDBLite | consensus disorder prediction | 596 | 615 | - | - | |
Cca02g02640 | 615 | ProSitePatterns | Protein kinases ATP-binding region signature. | 309 | 331 | IPR017441 | GO:0005524 | |
Cca02g02640 | 615 | SUPERFAMILY | Protein kinase-like (PK-like) | 283 | 578 | IPR011009 | - | |
Cca02g02640 | 615 | Pfam | Protein kinase domain | 306 | 576 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g02640 | 615 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 30 | 614 | - | - | |
Cca02g02640 | 615 | ProSiteProfiles | Protein kinase domain profile. | 303 | 593 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g02640 | 615 | SMART | serkin_6 | 303 | 578 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g02640 | 615 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 427 | 439 | IPR008271 | GO:0004672|GO:0006468 | |
Cca02g02640 | 615 | MobiDBLite | consensus disorder prediction | 586 | 615 | - | - | |
Cca02g02640 | 615 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 30 | 614 | IPR045874 | GO:0004672 | |
Cca02g02640 | 615 | Gene3D | Phosphorylase Kinase; domain 1 | 281 | 377 | - | - | |
Cca02g02640 | 615 | Gene3D | Transferase(Phosphotransferase) domain 1 | 378 | 587 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g02640 | Cca-Chr2 | 47556326 | 47558822 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g02640 | 200 | 591 | Receptor kinase-like Gene Family | AT5G38260 | 50.124 | 4.68e-127 | 386 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Cca02g02640 | Pkinase | 1.8e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g02640 | - | - | gmx:100785979 | 949.503 |