Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02639 ATGGGCACCAAGATTGTCCACTCTTTTACTTGTGGCCGTCTTGGGACTTTCTATTACCCTTTCACCAAGGCAGAACAACCACACTGTGGCTTGCTACCGATACATGATTGTGATAATCCTCATTCACCCATTATAACGATCCAGCTGGAGAAAAATGGAAAAAACTTAGAGCTTAATGGCGTCGTGCAGCAGAATGCCATTACAATTTTGGATGAAGATTTTCATAGGAGTTTACAACAAAACACTTGCCGCACTTTGAACAATAATTATAGTCTTCCTTCTCCTTCTCCTTTGTATTCTATTTATATAAAATATAACGTAACCCTGTTCCGATGCAAACAGGGCCTCAAAATCAACCAACCACCAAAACATTATTTGAAATACCCGTGCCATGGCTATGAGTATGATATTTATTATGACAGCCTTCCCTCTCCAAATAATGAGGAGGCTCATAACTTATTCTCATCCTGCTCAGTTTTTCTGTTACCATCAAAAGACGAGACGAATACCAAAGACATTCTATCGTTTGTAACTGCTGAGATGGTTCTTGAAGTAGTATTATCTAATGATTGTGATGAGTGCTATAATCACAGAGGAGGCCAATGTCGGCTTGACAACAATCAAAAGTTCTACTGTGACACAGGGAAAACCGGAAAGAAGTTGCTGGTAGTGGGCCTAGTGGCAGCAGCTTCGGTCTTGGTGATTGCTGGAGTTGTAGTGCTGGTGGTGGTTATGGCCTGCTTCAGGAGAAAGATCTTTCTGAGGGAGAATCCAACCCATCGGATTATTGAGGGGTTTCTGAAGGAACATGGACCCCTTCCAACATCTagGATGAGTGGAGTTTATGAATTTGTGTTACTGCTTTTGTTTTGTCACCTTACGCCACTTCTCTTGGCGGATGGATACCAACCAAAGTGTCCACCTTCGTTTGATTGTGGATATCTTGGCAATATCAGTTTCCCTTTTACTATAACAGAACGCAAGGACTGTGGCTTATTGCCCATACGCAATTGTCATTCTCCAGCTCTCAAAATGATCCAATTACAGAAAGATGGAAAATGGTTTCAGGTTGTACGCGTAACTCAGTTGCTGAGTAGTCCTACTACTACTTATACAACTTTTCAATTTAGAGACACCAATCTCAATGAGCTTCTGCAGAACCAAAATTGCGAAGCTTTCAGAAACAGTTATACTCTTCCTCACACCTCTCCCTTTGCTTCGTTTAGTATGCAATCAAGCACAATTGTGTATAGGTGCAACCGCAACCACCACGTCACTCCTCCCCCTGGCATGTATATTTATACAAACTGCTCTGATTACAATCTCTACTACAGTTCAGTCACGACGGGTGATTGGAGCTCTTTGAGAGGATGTACAAAGGTCCAGCTTCCAGTTAAAGACGTGCCTGACGCTAAAAACCCATTCACATTCAGAACTGCACTTATCACCACTCAAGTAAACTTGACTAAAGAATGTGCAGATTGCCACTATCGCCTAGGAGGGCAGTGTCAACTTGACAACAAATACAGATTTTATTGTGCCAACAGCATCGAGAAAACTAGAAGGAAGTTGCCGACAATGAAAACAGTTTCGGCTGTGGTGGCTGCTGGAGTTGTAGTGCTGTTGATGGTTTTGGCTTGCTGCTTCTCGAGAAAGATATTTTGGAGCAAGAATCCAACCCATCGGATTATTGAGGGGTTTTTGAAGGATCATGGGCCCCTTCCTACAGCTAGGTACAATTACTCAGAGGTTAAGAAAATGACCAACTCTTTTAGAAACAAATTAGGCCAAGGGGGATTTGGTAGTGTATACAAAGGGAAGCTACAAGATGGACGTGTTGTTGCAGTGAAGATTTTAAGTAAATCAGATGGCAATGGAGAAGATTTCATTAATGAAGTTGCAAGTATTAGCAGGACTGCACATGTTAACATTGTTAGACTTTTGGGATTCTGTCTGGACAATTCTAAACGAGCTCTAATATATGAGTTTATGCCTAATGGATCTCTTGACAAGTTTATATATGAAGACAAAAATCCACTACAATTTACTCATCAATTGGACTGCAAAATACTGTATGATATTGCAATTGGCATTGCACGTGGATTAGAGTACTTACACAGAGGTTGCAACACTAGAATCTTGCATTTTGACATTAAACCTCACAACATATTACTAGATGAGGATTTCTGTCCCAAAATATCAGATTTTGGACTTGCAAAATTATGTCCAAAAAAAGAAAGTGCCGTATCAATATTTGGTGCTAGAGGAACTGCGGGCTATATTGCGCCAGAAGTTTTTTCGAGAAATTTCGGTGTAGTATCACACAAGTCAGATGTTTATAGCTATGGAATGATGATCTTAGAAATGGTTGGAATGAAAAATAATATCAAAGTTGAAGTAAACCGGTCGAGTGAAATATATTTTCCTCACTGGATTTACAATCGTCTTGAATCAGATCAAGAACTTGGTTTACGAAATATAAGAAATGAAAGTGATGACAACACGATGAGAAAGATGACAATAGTGGGCTTATGGTGTATACAAACGTACCCTTCAATTCGCCCAGCCATTAGTAAAGTGGTGGAAATGTTAGAAAGTAAAGTTGAGTTATTGCAAATTCCACCTAAACCTTGTTTGTCTTCTCCTTCAACCTCTCCGATTCATTTGTCATGCGAGACACTATAG 2685 0.4019 MGTKIVHSFTCGRLGTFYYPFTKAEQPHCGLLPIHDCDNPHSPIITIQLEKNGKNLELNGVVQQNAITILDEDFHRSLQQNTCRTLNNNYSLPSPSPLYSIYIKYNVTLFRCKQGLKINQPPKHYLKYPCHGYEYDIYYDSLPSPNNEEAHNLFSSCSVFLLPSKDETNTKDILSFVTAEMVLEVVLSNDCDECYNHRGGQCRLDNNQKFYCDTGKTGKKLLVVGLVAAASVLVIAGVVVLVVVMACFRRKIFLRENPTHRIIEGFLKEHGPLPTSRMSGVYEFVLLLLFCHLTPLLLADGYQPKCPPSFDCGYLGNISFPFTITERKDCGLLPIRNCHSPALKMIQLQKDGKWFQVVRVTQLLSSPTTTYTTFQFRDTNLNELLQNQNCEAFRNSYTLPHTSPFASFSMQSSTIVYRCNRNHHVTPPPGMYIYTNCSDYNLYYSSVTTGDWSSLRGCTKVQLPVKDVPDAKNPFTFRTALITTQVNLTKECADCHYRLGGQCQLDNKYRFYCANSIEKTRRKLPTMKTVSAVVAAGVVVLLMVLACCFSRKIFWSKNPTHRIIEGFLKDHGPLPTARYNYSEVKKMTNSFRNKLGQGGFGSVYKGKLQDGRVVAVKILSKSDGNGEDFINEVASISRTAHVNIVRLLGFCLDNSKRALIYEFMPNGSLDKFIYEDKNPLQFTHQLDCKILYDIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKLCPKKESAVSIFGARGTAGYIAPEVFSRNFGVVSHKSDVYSYGMMILEMVGMKNNIKVEVNRSSEIYFPHWIYNRLESDQELGLRNIRNESDDNTMRKMTIVGLWCIQTYPSIRPAISKVVEMLESKVELLQIPPKPCLSSPSTSPIHLSCETL 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02639 894 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 278 892 - -
Cca02g02639 894 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 5 277 - -
Cca02g02639 894 ProSiteProfiles Protein kinase domain profile. 589 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02639 894 Pfam Protein kinase domain 593 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02639 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Cca02g02639 894 ProSitePatterns Protein kinases ATP-binding region signature. 595 617 IPR017441 GO:0005524
Cca02g02639 894 SUPERFAMILY Protein kinase-like (PK-like) 573 865 IPR011009 -
Cca02g02639 894 SMART serkin_6 589 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02639 894 Gene3D Transferase(Phosphotransferase) domain 1 664 872 - -
Cca02g02639 894 PANTHER RUST RESISTANCE KINASE LR10-RELATED 278 892 IPR045874 GO:0004672
Cca02g02639 894 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 277 IPR045874 GO:0004672
Cca02g02639 894 Gene3D Phosphorylase Kinase; domain 1 571 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02639 Cca-Chr2 47541679 47553048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02639 282 890 Receptor kinase-like Gene Family AT1G66910 37.288 2.62e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Cca02g02639 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02639 - - gmx:100783861 899.812