Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02633 ATGGCCTTCCAAACTCTCAACTGCCTCCGGACCACCTCATTAGCACCGTGTTCAAGGATTCAACTTGCATTATCAGATGACTCTCCTCAGGATCCCTTTCAATTTATATCTGCTGTTACCAGTGTTCAAGATGGAAAGTGTCCAGCCTCTTGGGATTGTGGAGATCTTGGCCAGATTAAGTTTCCTTTCACAACCACACTGCAACCACACTGTGGCGTACTGCCCATACGTGGTTGTGAACAAAAAGACCCCCAGGCTTCCAAAACCATTCAACTCAACAATCCAACACTAAGATCCTACAACGTTCTACAAGTTGAACCTCGTACCATAATCATCAAAGACGATGCTCAATATCATTATTTGCAAACCAACAATTGCACACTCTTCACAAACAATTTTACTCTTCCTCACGCCTCTCATTTAGCTTCTTTCTACATCAAATATAATATCACTATCTTCAGATGCAATCGTTCCCTCAACGCCACACTTCCCAAATATATTTATAAATATTCAAATTGTTCTGACTACGATATCTACTATGGTCCTCCAAATACTGAAATTCCTTTGGGCTTCAAGTGGCCAAGCTTTTTAGCACCATGTTCAACCATTCAGCTTGCAGTACAAGCAAAACCTACTAGCAACCCCTTTCAATTTCTGTCTGCTAGTATCGCTATTGAAGTTCGATTATCTGATACTTGTGAAAGCTGCCTTAATCGCGGAGAAGGCCAATGTTTACTAGACAGTAAAGGAAATTTCTATTGCGCCAAAGAGAATACAAGTTTGGCGTGGAAATTAGGACTAGGTATAGGACTCCCTGGCATTATTATAATTGGGATACTGATAATATGGTACTGCAAACCAAGATGTGTGTCTTATTTCTACTCAAATCCAAAACAAGAGAGTGCGAGTATCTACTTTGGGGTCCCAGTGTTCACCTATAAGGATCTTGAAAAAGCAACAAAACGTTTTGACCGCTCTAGAGAACTAGGAGAAGGAGGATTTGGTATCGTTTACTATGGAAAACTCGACGATGGACGTGAAGTTGCTGTAAAGCGCTTATATGAGCACAACTATAGGCGATTAGAACAATTCATGAATGAAATCAAAATTCTCACACGCTTGCGCCATAAAAATTTAGTGTCTCTCTATGGCTGCACTTCACGTTACAGCCGTGAACTATTGCTCGTGTTTGAATACATTTCAAATGGGACGGTGGCCAGTCACCTCCATCATCATGGATCAACAAATCGTAGCTTTTTACCATGGCCTATCCGAATCAAAGTGGCCATAGAGACTGCTACTGCGTTGGTCCATCTCCATGCTTCTGACatcattcacccaattgatctgaaccggcataaggatgaaataaacttggctgaTCTAGCTATAAGGAAGATTCAAAAAAGTGAAATTGCTCAGCTGGTGGATCCTTCCCTTGGTTTTGAGTCAAATAGTGATGTTAAAAGGCAAATAACTTCAGTGGCAGAATTGGCTTTTCAGTGCTTGCAACGGGATAAAGAATTGAGACCCTCTATGGACCAAGTTTTGGAAGTGCTGAGGACAATTCAAAGTTGGAAGGACGAGTTTCGGCATCTAAAGGAATTGCATTTTGACAGTAAAGGTCCATTATCACCAGATCATGATGAGATGAAATTGTTGAGGGATGTGAATTTGATCTCTTCCCCAAAGGCTGTGACAGATAAATGGAATAGCGATTCCACTAGTCCTAATGTTAGTGATCAATCGCTAAACAAAATGTAA 1764 0.3974 MAFQTLNCLRTTSLAPCSRIQLALSDDSPQDPFQFISAVTSVQDGKCPASWDCGDLGQIKFPFTTTLQPHCGVLPIRGCEQKDPQASKTIQLNNPTLRSYNVLQVEPRTIIIKDDAQYHYLQTNNCTLFTNNFTLPHASHLASFYIKYNITIFRCNRSLNATLPKYIYKYSNCSDYDIYYGPPNTEIPLGFKWPSFLAPCSTIQLAVQAKPTSNPFQFLSASIAIEVRLSDTCESCLNRGEGQCLLDSKGNFYCAKENTSLAWKLGLGIGLPGIIIIGILIIWYCKPRCVSYFYSNPKQESASIYFGVPVFTYKDLEKATKRFDRSRELGEGGFGIVYYGKLDDGREVAVKRLYEHNYRRLEQFMNEIKILTRLRHKNLVSLYGCTSRYSRELLLVFEYISNGTVASHLHHHGSTNRSFLPWPIRIKVAIETATALVHLHASDIIHPIDLNRHKDEINLADLAIRKIQKSEIAQLVDPSLGFESNSDVKRQITSVAELAFQCLQRDKELRPSMDQVLEVLRTIQSWKDEFRHLKELHFDSKGPLSPDHDEMKLLRDVNLISSPKAVTDKWNSDSTSPNVSDQSLNKM 587
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02633 587 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Cca02g02633 587 Pfam Protein tyrosine and serine/threonine kinase 326 446 IPR001245 GO:0004672|GO:0006468
Cca02g02633 587 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 39 446 IPR044652 -
Cca02g02633 587 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 447 584 IPR044652 -
Cca02g02633 587 SUPERFAMILY Protein kinase-like (PK-like) 297 446 IPR011009 -
Cca02g02633 587 Gene3D Transferase(Phosphotransferase) domain 1 449 535 - -
Cca02g02633 587 Gene3D Transferase(Phosphotransferase) domain 1 306 448 - -
Cca02g02633 587 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 39 446 - -
Cca02g02633 587 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 447 584 - -
Cca02g02633 587 MobiDBLite consensus disorder prediction 566 587 - -
Cca02g02633 587 ProSiteProfiles Protein kinase domain profile. 323 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca02g02633 Cca-Chr2 47499574 47505952 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02633 448 580 Receptor kinase-like Gene Family AT1G25390 42.647 4.11e-26 111
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Cca02g02633 PK_Tyr_Ser-Thr 1.6e-20 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02633 - - gmx:100790240 604.364