Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g02633 | ATGGCCTTCCAAACTCTCAACTGCCTCCGGACCACCTCATTAGCACCGTGTTCAAGGATTCAACTTGCATTATCAGATGACTCTCCTCAGGATCCCTTTCAATTTATATCTGCTGTTACCAGTGTTCAAGATGGAAAGTGTCCAGCCTCTTGGGATTGTGGAGATCTTGGCCAGATTAAGTTTCCTTTCACAACCACACTGCAACCACACTGTGGCGTACTGCCCATACGTGGTTGTGAACAAAAAGACCCCCAGGCTTCCAAAACCATTCAACTCAACAATCCAACACTAAGATCCTACAACGTTCTACAAGTTGAACCTCGTACCATAATCATCAAAGACGATGCTCAATATCATTATTTGCAAACCAACAATTGCACACTCTTCACAAACAATTTTACTCTTCCTCACGCCTCTCATTTAGCTTCTTTCTACATCAAATATAATATCACTATCTTCAGATGCAATCGTTCCCTCAACGCCACACTTCCCAAATATATTTATAAATATTCAAATTGTTCTGACTACGATATCTACTATGGTCCTCCAAATACTGAAATTCCTTTGGGCTTCAAGTGGCCAAGCTTTTTAGCACCATGTTCAACCATTCAGCTTGCAGTACAAGCAAAACCTACTAGCAACCCCTTTCAATTTCTGTCTGCTAGTATCGCTATTGAAGTTCGATTATCTGATACTTGTGAAAGCTGCCTTAATCGCGGAGAAGGCCAATGTTTACTAGACAGTAAAGGAAATTTCTATTGCGCCAAAGAGAATACAAGTTTGGCGTGGAAATTAGGACTAGGTATAGGACTCCCTGGCATTATTATAATTGGGATACTGATAATATGGTACTGCAAACCAAGATGTGTGTCTTATTTCTACTCAAATCCAAAACAAGAGAGTGCGAGTATCTACTTTGGGGTCCCAGTGTTCACCTATAAGGATCTTGAAAAAGCAACAAAACGTTTTGACCGCTCTAGAGAACTAGGAGAAGGAGGATTTGGTATCGTTTACTATGGAAAACTCGACGATGGACGTGAAGTTGCTGTAAAGCGCTTATATGAGCACAACTATAGGCGATTAGAACAATTCATGAATGAAATCAAAATTCTCACACGCTTGCGCCATAAAAATTTAGTGTCTCTCTATGGCTGCACTTCACGTTACAGCCGTGAACTATTGCTCGTGTTTGAATACATTTCAAATGGGACGGTGGCCAGTCACCTCCATCATCATGGATCAACAAATCGTAGCTTTTTACCATGGCCTATCCGAATCAAAGTGGCCATAGAGACTGCTACTGCGTTGGTCCATCTCCATGCTTCTGACatcattcacccaattgatctgaaccggcataaggatgaaataaacttggctgaTCTAGCTATAAGGAAGATTCAAAAAAGTGAAATTGCTCAGCTGGTGGATCCTTCCCTTGGTTTTGAGTCAAATAGTGATGTTAAAAGGCAAATAACTTCAGTGGCAGAATTGGCTTTTCAGTGCTTGCAACGGGATAAAGAATTGAGACCCTCTATGGACCAAGTTTTGGAAGTGCTGAGGACAATTCAAAGTTGGAAGGACGAGTTTCGGCATCTAAAGGAATTGCATTTTGACAGTAAAGGTCCATTATCACCAGATCATGATGAGATGAAATTGTTGAGGGATGTGAATTTGATCTCTTCCCCAAAGGCTGTGACAGATAAATGGAATAGCGATTCCACTAGTCCTAATGTTAGTGATCAATCGCTAAACAAAATGTAA | 1764 | 0.3974 | MAFQTLNCLRTTSLAPCSRIQLALSDDSPQDPFQFISAVTSVQDGKCPASWDCGDLGQIKFPFTTTLQPHCGVLPIRGCEQKDPQASKTIQLNNPTLRSYNVLQVEPRTIIIKDDAQYHYLQTNNCTLFTNNFTLPHASHLASFYIKYNITIFRCNRSLNATLPKYIYKYSNCSDYDIYYGPPNTEIPLGFKWPSFLAPCSTIQLAVQAKPTSNPFQFLSASIAIEVRLSDTCESCLNRGEGQCLLDSKGNFYCAKENTSLAWKLGLGIGLPGIIIIGILIIWYCKPRCVSYFYSNPKQESASIYFGVPVFTYKDLEKATKRFDRSRELGEGGFGIVYYGKLDDGREVAVKRLYEHNYRRLEQFMNEIKILTRLRHKNLVSLYGCTSRYSRELLLVFEYISNGTVASHLHHHGSTNRSFLPWPIRIKVAIETATALVHLHASDIIHPIDLNRHKDEINLADLAIRKIQKSEIAQLVDPSLGFESNSDVKRQITSVAELAFQCLQRDKELRPSMDQVLEVLRTIQSWKDEFRHLKELHFDSKGPLSPDHDEMKLLRDVNLISSPKAVTDKWNSDSTSPNVSDQSLNKM | 587 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g02633 | 587 | ProSitePatterns | Protein kinases ATP-binding region signature. | 329 | 351 | IPR017441 | GO:0005524 | |
Cca02g02633 | 587 | Pfam | Protein tyrosine and serine/threonine kinase | 326 | 446 | IPR001245 | GO:0004672|GO:0006468 | |
Cca02g02633 | 587 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 39 | 446 | IPR044652 | - | |
Cca02g02633 | 587 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 447 | 584 | IPR044652 | - | |
Cca02g02633 | 587 | SUPERFAMILY | Protein kinase-like (PK-like) | 297 | 446 | IPR011009 | - | |
Cca02g02633 | 587 | Gene3D | Transferase(Phosphotransferase) domain 1 | 449 | 535 | - | - | |
Cca02g02633 | 587 | Gene3D | Transferase(Phosphotransferase) domain 1 | 306 | 448 | - | - | |
Cca02g02633 | 587 | PANTHER | WALL ASSOCIATED KINASE-LIKE PROTEIN | 39 | 446 | - | - | |
Cca02g02633 | 587 | PANTHER | WALL ASSOCIATED KINASE-LIKE PROTEIN | 447 | 584 | - | - | |
Cca02g02633 | 587 | MobiDBLite | consensus disorder prediction | 566 | 587 | - | - | |
Cca02g02633 | 587 | ProSiteProfiles | Protein kinase domain profile. | 323 | 587 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g02633 | Cca-Chr2 | 47499574 | 47505952 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g02633 | 448 | 580 | Receptor kinase-like Gene Family | AT1G25390 | 42.647 | 4.11e-26 | 111 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Cca02g02633 | PK_Tyr_Ser-Thr | 1.6e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g02633 | - | - | gmx:100790240 | 604.364 |