Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02626 ATGGTTTCGAGGTCATATTCTAACTTGTTAGATCTTACTTCCTGTGGCTCCCCAAGTTTTGGTCGCGAGAAGAAAAGGCTCCCTCGAGTGGCAACTGTTGCTGGAGTATTGTCAGAGCTAGATGATGAGACCGGCAACAGTGTTGGCTCTGATACTCCATCCTCAGTCTCTCAAGAGAGGATGATCATTGTTGGTAACCAGCTTCCATTAAGGGCACACAGAAAAGACAATGGTACTTGGGAGTTCACATGGGATGAAGACTCGCTTCTTTTGCAGCTGAAAGATGGTCTTGGGGATGATGTGGAAACTGTCTATATTGGTTGTCTTAAAGAGGAGATTGAGCCAAGTGAGCAAGATGATGTTGCTCAGTACTTGCTTGACACTTTCAAATGCGTCCCCACGTTCCTCCCTCCTGAGCTTTTTACTAAATTCTATCATGGATTCTGCAAACAACATCTATGGCCTTTATTTCACTACATGCTTCCACTGTCACCTGATCTTGGAGGTCGATTCGATAGGTCCCTTTGGCAAGCTTATGTTTCAGTGAACAAGATATTTGCGGATAAAGTGATGGAAGTCATTAGCCCTGATGATGATTTTGTGTGGGTTCATGACTACCATCTGATGGTACTCCCAACTTTTTTGCGAAAGAGATTTAACAGGGTGAGGCTAGGATTCTTCCTCCATAGTCCATTTCCTTCATCTGAGATATACCGAACCCTTCCTGTTAGGGATGAACTTCTTAGAGCTCTTCTGAATTCTGACCTTATTGGGTTTCATACTTTTGATTATGCCAGGCATTTCCTTTCCTGCTGCAGTAGAATGCTTGGGATTTCTTACCAATCTAAGCGGGGCTATATTGGTCTTGAGTACTATGGTAGAACTGTAAGCATTAAGATTCTTCCTGTTGGTATTCATATAGGTCAGCTCCAATCAGTCATGAGTCATCCTGAGACAGAAAACAAGGTTGCAGAGTTAAAAAACCAATTCAGAGATCAAATTGTGCTGCTTGGGGTCGATGACATGGATATATTCAAAGGAATCAGCTTAAAACTTTTGGCCATGGAACAATTGCTTTTACAACATCCTGATAAGAGGGGCAGAGTTGTTCTGGTCCAAATTGCAAACCCTGCAAGAGGCCGGGGAAAGGATGTCCAGGAGGTGCAAAGTGAAACTTATGCCACGGTGAAGAGGATAAATGATACATTTGGAAGGTCTGGATACACACCTGTAGTCTTGATTGATACACCACTTCAGAGTTATGAGCGAATTGCTTACTATGTGATTGCAGAATGTTGCCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATACCCTATGAATATGTAATTTGTAGACAAGGAAATGAGAAGATAGATGAGATTTTAGGGACAGACCCTCTCGCTCAAAAGAGGAGCATGCTGGTGGTGTCTGAGTTTATTGGCTGCTCCCCTTCATTGAGTGGGGCAATTCGAGTAAATCCATGGAACATTGATGCTGTTGCTGAAGCTATGGATTCTGCGCTGATGGTCCCGGAGGCTGAAAAGCAGATGCGGCACGAGAAGCATTATAGGTATGTTAGTACGCATGATGTTGCATATTGGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGCAGAGAGCATCTGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGCTTTCGAGTGATTGCTTTGGATCCAAACTTTAGAAAGCTATCCGTGGAACATATTGTTTCAGCTTATAAGAGGACCAAGCACCGAGCAATTCTTCTGGATTATGATGGTACTATGGTGCAGCCTGGATCAATGAGTACAACACCTAATGCTGAAGCCGTTAGCCTCTTGAACAGCTTGTGCAGGGACACCAAGAATTGTGTTTTCATTGTAAGTGGAAGGGAGAGAAAGACTcttactgaatggttttcttcttgtgaaaggatgggaattgctgcagagcatggttattttgtgagGGCAAATCAAAATgcagaatgggaagcttgtgttccggtgcctgattttgagtggaaacagattgccgagccagttatgcagttatatacggaaacaaccgatggttctaacatagaggccaaagaaagcgctcttgtttggaattatgagtatgcagatcgagactttggttcatgccaagctaaggagctttttgatcatttggaaagtgttcttgccaatgagcctgtttctgttaaaagcagtccaaacattgtggaagtaaagcctcagggtgtgagtaagggtattgtagcagaacgtcttctcttaacaatgcaacaaaagggagtgactcccgattttgttctatgcattggggatgacagatcagatgaggacatgtttggggtgataatgaatgcaagggcatcactatctccagttgctgaggtgttcccttgcaccgttggccagaaacctagcaaggccaagtattacttggacgacacaagcgaGATTTTGAGAATGTTGCAGGGCCTTGCCAATGCTTCAGAGATGCCTACTAGAATTTCTTCCTTACCTAGTCATTAA 2559 0.3419 MVSRSYSNLLDLTSCGSPSFGREKKRLPRVATVAGVLSELDDETGNSVGSDTPSSVSQERMIIVGNQLPLRAHRKDNGTWEFTWDEDSLLLQLKDGLGDDVETVYIGCLKEEIEPSEQDDVAQYLLDTFKCVPTFLPPELFTKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGISYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMSHPETENKVAELKNQFRDQIVLLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGRVVLVQIANPARGRGKDVQEVQSETYATVKRINDTFGRSGYTPVVLIDTPLQSYERIAYYVIAECCLVTAVRDGMNLIPYEYVICRQGNEKIDEILGTDPLAQKRSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALMVPEAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACREHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMVQPGSMSTTPNAEAVSLLNSLCRDTKNCVFIVSGRERKTLTEWFSSCERMGIAAEHGYFVRANQNAEWEACVPVPDFEWKQIAEPVMQLYTETTDGSNIEAKESALVWNYEYADRDFGSCQAKELFDHLESVLANEPVSVKSSPNIVEVKPQGVSKGIVAERLLLTMQQKGVTPDFVLCIGDDRSDEDMFGVIMNARASLSPVAEVFPCTVGQKPSKAKYYLDDTSEILRMLQGLANASEMPTRISSLPSH 852
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02626 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 842 IPR001830 GO:0003824|GO:0005992
Cca02g02626 852 SUPERFAMILY HAD-like 591 837 IPR036412 -
Cca02g02626 852 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Cca02g02626 852 CDD HAD_TPP 592 828 - -
Cca02g02626 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Cca02g02626 852 Gene3D Glycogen Phosphorylase B; 53 311 - -
Cca02g02626 852 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 842 - -
Cca02g02626 852 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
Cca02g02626 852 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Cca02g02626 852 TIGRFAM T6PP: trehalose-phosphatase 589 837 IPR003337 GO:0003824|GO:0005992
Cca02g02626 852 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 593 795 IPR006379 -
Cca02g02626 852 Gene3D - 590 704 IPR023214 -
Cca02g02626 852 Gene3D - 716 847 IPR023214 -
Cca02g02626 852 Gene3D Glycogen Phosphorylase B; 312 528 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca02g02626 Cca-Chr2 47411011 47415643 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02626 1 837 Trehalose Biosynthesis Gene Families AT4G17770 79.762 0.0 1427
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02626 K16055 - gmx:100782799 1650.18